Literature DB >> 33754178

Analytical validation of an RI sample cartridge with the RapidHIT® ID system.

Anqi Chen1,2, Yue Yang2, Qi Yang2, Ruiyang Tao2, Chong Chen2, Suhua Zhang3, Chengtao Li4,5.   

Abstract

Evaluating the short tandem repeat (STR) in the field is important for the timely identification of a suspect. Several lines showed that the RapidHIT® ID system is reliable for DNA genotyping with buccal swabs and naked DNA. However, the application of this approach with blood samples has been poorly investigated. Because blood samples are among the most common forensic samples in our laboratory, further studies should be conducted. Here, we assessed the analytical performance of 19 STR loci with a newly developed RapidINTEL (RI) Sample Cartridge Kit by using the blood samples with known genotypes. Several commonly used substrates were included in the sensitivity study, and FTA cards proved to be the most promising sample carrier for blood storage and later identification. There was superior sensitivity and specificity with a 100% concordance rate for 0.5 μL of blood or 7 ng of genomic DNA. The performance for blood samples was comparable with that for the standard protocol. High success rate (90.57%) and high-concordance (100%) genotyping were automatically achieved over a wide range of operating conditions except for TH01. No contamination was observed throughout the study. Hematin, indigo, and humic acid had limited influence on the instrument system, while urea and melanin dramatically affected the genotyping results. Generally, the newly developed RI sample cartridge provided an alternative method for the STR genotyping of single-source blood samples over a wide range of operating conditions.

Entities:  

Keywords:  Blood samples; FTA cards; Rapid DNA; Rapid Intel (RI) sample cartridge; RapidHIT®ID system; SWGDAM validation

Year:  2021        PMID: 33754178     DOI: 10.1007/s00414-021-02553-8

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  10 in total

1.  ACTBP2 gene frequency distribution and sequencing of the allelic ladder and variants in the Japanese and Chinese populations.

Authors:  C Liu; N Harashima; Y Katsuyama; M Ota; A Arakura; H Fukushima
Journal:  Int J Legal Med       Date:  1997       Impact factor: 2.686

2.  Comparative tolerance of two massively parallel sequencing systems to common PCR inhibitors.

Authors:  Kyleen Elwick; Xiangpei Zeng; Jonathan King; Bruce Budowle; Sheree Hughes-Stamm
Journal:  Int J Legal Med       Date:  2017-09-27       Impact factor: 2.686

3.  Internal validation study of a newly developed 24-plex Y-STRs genotyping system for forensic application.

Authors:  Haotian Meng; Yuxin Guo; Xiaoye Jin; Chong Chen; Wei Cui; Jianfeng Shi; Xinxin Wang; Ruolin Liu; Bofeng Zhu
Journal:  Int J Legal Med       Date:  2019-02-28       Impact factor: 2.686

4.  The use of FTA cards to acquire DNA profiles from postmortem cases.

Authors:  Henrik Green; Andreas Tillmar; Gisela Pettersson; Kerstin Montelius
Journal:  Int J Legal Med       Date:  2019-02-12       Impact factor: 2.686

5.  Internal Validation of RapidHIT® ID ACE Sample Cartridge and Assessment of the EXT Sample Cartridge*.

Authors:  Gray D Amick; Roy R Swiger
Journal:  J Forensic Sci       Date:  2018-10-02       Impact factor: 1.832

6.  Genetic data provided by 21 autosomal STR loci from Chinese Tujia ethnic group.

Authors:  Guo-Lian Yuan; Chun-Mei Shen; Hong-Dan Wang; Wen-Juan Liu; Guang Yang; Jiang-Wei Yan; Hai-Xia Qin; Tong Xie; Hangyan Ran; Jie Yuan; Zuochun Liu; Bofeng Zhu
Journal:  Mol Biol Rep       Date:  2012-10-13       Impact factor: 2.316

Review 7.  Molecular DNA Analysis in Forensic Identification.

Authors:  Raluca Dumache; Veronica Ciocan; Camelia Muresan; Alexandra Enache
Journal:  Clin Lab       Date:  2016       Impact factor: 1.138

8.  Development and validation of a novel SiFaSTRTM 23-plex system.

Authors:  Hancheng Zheng; Ruiyang Tao; Jingyi Zhang; Jiashuo Zhang; Shouyu Wang; Zihao Yang; Qiannan Xu; Yuzhen Gao; Suhua Zhang; Chengtao Li
Journal:  Electrophoresis       Date:  2019-06-26       Impact factor: 3.535

9.  Current developments in forensic interpretation of mixed DNA samples (Review).

Authors:  Na Hu; Bin Cong; Shujin Li; Chunling Ma; Lihong Fu; Xiaojing Zhang
Journal:  Biomed Rep       Date:  2014-01-28

10.  Comparison of stool collection and storage on Whatman FTA Elute cards versus frozen stool for enteropathogen detection using the TaqMan Array Card PCR assay.

Authors:  Tahaniyat Lalani; Michele D Tisdale; Jie Liu; Indrani Mitra; Cliff Philip; Elizabeth Odundo; Faviola Reyes; Mark P Simons; Jamie A Fraser; Emma Hutley; Patrick Connor; Brett E Swierczewski; Eric Houpt; David R Tribble; Mark S Riddle
Journal:  PLoS One       Date:  2018-08-30       Impact factor: 3.240

  10 in total
  1 in total

1.  Validation of the Applied Biosystems RapidHIT ID instrument and ACE GlobalFiler Express sample cartridge.

Authors:  Jennifer Churchill Cihlar; Kapema Bupe Kapema; Bruce Budowle
Journal:  Int J Legal Med       Date:  2021-10-13       Impact factor: 2.686

  1 in total

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