Literature DB >> 33754164

Micromonospora veneta sp. nov., an endophytic actinobacterium with potential for nitrogen fixation and for bioremediation.

Onuma Kaewkla1,2, Chanwit Suriyachadkun3, Christopher Milton Mathew Franco4.   

Abstract

Strain CAP181T, an endophytic actinobacterium, was isolated from a surface sterilized root sample of a native pine tree, Flinders University, Adelaide, South Australia. Chemotaxonomic data including cell wall components, major fatty acids, and major menaquinones confirmed the affiliation of strain CAP181T to the genus Micromonospora. This strain was Gram stain positive with well-developed substrate mycelia to form a single spore with hairy surface. The phylogenetic tree showed that M. coerulea NBRC 13504 T is the closest phylogenetic neighbour, sharing 99.2% 16S rRNA gene similarity and the next closest neighbor is M. chaiyaphumensis DSM 45246 T (98.7%). Genome mining of this strain revealed genes encoding to enzymes relating to nitrogen fixation and bioremediation. Based on genotypic and phenotypic studies including DNA-DNA hybridization data, strain CAP181T was different from any of the closely related species with valid names. The name proposed for the new species is Micromonospora veneta sp. nov. The type strain is CAP181T (= DSM 109713 T = NRRL B-65535 T).
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH, DE part of Springer Nature.

Entities:  

Keywords:  Endophytic actinobacterium; Genome mining; Micromonospora venata sp. nov.

Mesh:

Year:  2021        PMID: 33754164     DOI: 10.1007/s00203-021-02260-3

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  20 in total

1.  Micromonospora cremea sp. nov. and Micromonospora zamorensis sp. nov., isolated from the rhizosphere of Pisum sativum.

Authors:  Lorena Carro; Rüdiger Pukall; Cathrin Spröer; Reiner M Kroppenstedt; Martha E Trujillo
Journal:  Int J Syst Evol Microbiol       Date:  2012-01-27       Impact factor: 2.747

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3.  Numerical taxonomy of Nocardia.

Authors:  P V Kurup; J A Schmitt
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4.  [Exercise in thin air].

Authors:  S Oseid
Journal:  Tidsskr Nor Laegeforen       Date:  1966-07-15

5.  Micromonospora luteifusca sp. nov. isolated from cultivated Pisum sativum.

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