Literature DB >> 33753769

Learned spectral decoloring enables photoacoustic oximetry.

Janek Gröhl1,2, Thomas Kirchner3, Tim J Adler4,5, Lina Hacker6, Niklas Holzwarth4,7, Adrián Hernández-Aguilera8, Mildred A Herrera8, Edgar Santos8, Sarah E Bohndiek6,9, Lena Maier-Hein10,11.   

Abstract

The ability of photoacoustic imaging to measure functional tissue properties, such as blood oxygenation sO[Formula: see text], enables a wide variety of possible applications. sO[Formula: see text] can be computed from the ratio of oxyhemoglobin HbO[Formula: see text] and deoxyhemoglobin Hb, which can be distuinguished by multispectral photoacoustic imaging due to their distinct wavelength-dependent absorption. However, current methods for estimating sO[Formula: see text] yield inaccurate results in realistic settings, due to the unknown and wavelength-dependent influence of the light fluence on the signal. In this work, we propose learned spectral decoloring to enable blood oxygenation measurements to be inferred from multispectral photoacoustic imaging. The method computes sO[Formula: see text] pixel-wise, directly from initial pressure spectra [Formula: see text], which represent initial pressure values at a fixed spatial location [Formula: see text] over all recorded wavelengths [Formula: see text]. The method is compared to linear unmixing approaches, as well as pO[Formula: see text] and blood gas analysis reference measurements. Experimental results suggest that the proposed method is able to obtain sO[Formula: see text] estimates from multispectral photoacoustic measurements in silico, in vitro, and in vivo.

Entities:  

Year:  2021        PMID: 33753769      PMCID: PMC7985523          DOI: 10.1038/s41598-021-83405-8

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  29 in total

1.  The composition of the adult human body as determined by chemical analysis.

Authors:  R M FORBES; A R COOPER; H H MITCHELL
Journal:  J Biol Chem       Date:  1953-07       Impact factor: 5.157

Review 2.  Review article: Can venous blood gas analysis replace arterial in emergency medical care.

Authors:  Anne-Maree Kelly
Journal:  Emerg Med Australas       Date:  2010-12       Impact factor: 2.151

3.  Unmixing Molecular Agents From Absorbing Tissue in Multispectral Optoacoustic Tomography.

Authors:  Stratis Tzoumas; Nikolaos Deliolanis; Stefan Morscher; Vasilis Ntziachristos
Journal:  IEEE Trans Med Imaging       Date:  2013-08-29       Impact factor: 10.048

Review 4.  Optical properties of biological tissues: a review.

Authors:  Steven L Jacques
Journal:  Phys Med Biol       Date:  2013-05-10       Impact factor: 3.609

5.  Multispectral Optoacoustic Tomography of Benign and Malignant Thyroid Disorders: A Pilot Study.

Authors:  Wolfgang Roll; Niklas A Markwardt; Max Masthoff; Anne Helfen; Jing Claussen; Michel Eisenblätter; Alexa Hasenbach; Sven Hermann; Angelos Karlas; Moritz Wildgruber; Vasilis Ntziachristos; Michael Schäfers
Journal:  J Nucl Med       Date:  2019-03-08       Impact factor: 10.057

6.  Monte Carlo simulation of photon migration in 3D turbid media accelerated by graphics processing units.

Authors:  Qianqian Fang; David A Boas
Journal:  Opt Express       Date:  2009-10-26       Impact factor: 3.894

7.  Blind source unmixing in multi-spectral optoacoustic tomography.

Authors:  Jürgen Glatz; Nikolaos C Deliolanis; Andreas Buehler; Daniel Razansky; Vasilis Ntziachristos
Journal:  Opt Express       Date:  2011-02-14       Impact factor: 3.894

8.  Ethnic variation in melanin content and composition in photoexposed and photoprotected human skin.

Authors:  Simon Alaluf; Derek Atkins; Karen Barrett; Margaret Blount; Nik Carter; Alan Heath
Journal:  Pigment Cell Res       Date:  2002-04

9.  Estimating blood oxygenation from photoacoustic images: can a simple linear spectroscopic inversion ever work?

Authors:  Roman Hochuli; Lu An; Paul C Beard; Benjamin T Cox
Journal:  J Biomed Opt       Date:  2019-12       Impact factor: 3.170

10.  Photoacoustics resolves species-specific differences in hemoglobin concentration and oxygenation.

Authors:  Lina Hacker; Joanna Brunker; Ewan St John Smith; Isabel Quiros-Gonzalez; Sarah E Bohndiek
Journal:  J Biomed Opt       Date:  2020-09       Impact factor: 3.170

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  14 in total

1.  Machine learning enabled multiple illumination quantitative optoacoustic oximetry imaging in humans.

Authors:  Thomas Kirchner; Michael Jaeger; Martin Frenz
Journal:  Biomed Opt Express       Date:  2022-04-05       Impact factor: 3.562

2.  High-resolution label-free mapping of murine kidney vasculature by raster-scanning optoacoustic mesoscopy: an ex vivo study.

Authors:  Colin A Goebel; Emma Brown; Fabian B Fahlbusch; Alexandra L Wagner; Adrian Buehler; Thomas Raupach; Martin Hohmann; Moritz Späth; Neal Burton; Joachim Woelfle; Michael Schmidt; Andrea Hartner; Adrian P Regensburger; Ferdinand Knieling
Journal:  Mol Cell Pediatr       Date:  2022-07-04

Review 3.  Functional photoacoustic microscopy of hemodynamics: a review.

Authors:  Chao Liu; Lidai Wang
Journal:  Biomed Eng Lett       Date:  2022-04-10

4.  Superpixel spectral unmixing framework for the volumetric assessment of tissue chromophores: A photoacoustic data-driven approach.

Authors:  Valeria Grasso; Regine Willumeit-Rӧmer; Jithin Jose
Journal:  Photoacoustics       Date:  2022-05-11

5.  Semantic segmentation of multispectral photoacoustic images using deep learning.

Authors:  Melanie Schellenberg; Kris K Dreher; Niklas Holzwarth; Fabian Isensee; Annika Reinke; Nicholas Schreck; Alexander Seitel; Minu D Tizabi; Lena Maier-Hein; Janek Gröhl
Journal:  Photoacoustics       Date:  2022-03-05

6.  SIMPA: an open-source toolkit for simulation and image processing for photonics and acoustics.

Authors:  Janek Gröhl; Kris K Dreher; Melanie Schellenberg; Tom Rix; Niklas Holzwarth; Patricia Vieten; Leonardo Ayala; Sarah E Bohndiek; Alexander Seitel; Lena Maier-Hein
Journal:  J Biomed Opt       Date:  2022-04       Impact factor: 3.758

7.  Model-based optical and acoustical compensation for photoacoustic tomography of heterogeneous mediums.

Authors:  Alexander Pattyn; Zackary Mumm; Naser Alijabbari; Neb Duric; Mark A Anastasio; Mohammad Mehrmohammadi
Journal:  Photoacoustics       Date:  2021-05-19

8.  In Vitro and In Vivo Multispectral Photoacoustic Imaging for the Evaluation of Chromophore Concentration.

Authors:  Aneline Dolet; Rita Ammanouil; Virginie Petrilli; Cédric Richard; Piero Tortoli; Didier Vray; François Varray
Journal:  Sensors (Basel)       Date:  2021-05-12       Impact factor: 3.576

9.  Perspective on fast-evolving photoacoustic tomography.

Authors:  Junjie Yao; Lihong V Wang
Journal:  J Biomed Opt       Date:  2021-06       Impact factor: 3.170

10.  Multiple illumination learned spectral decoloring for quantitative optoacoustic oximetry imaging.

Authors:  Thomas Kirchner; Martin Frenz
Journal:  J Biomed Opt       Date:  2021-08       Impact factor: 3.170

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