Literature DB >> 33747908

Identification of Five Glycolysis-Related Gene Signature and Risk Score Model for Colorectal Cancer.

Jun Zhu1, Shuai Wang1, Han Bai2, Ke Wang1, Jun Hao3, Jian Zhang4, Jipeng Li1.   

Abstract

Metabolic changes, especially in glucose metabolism, are widely established during the occurrence and development of tumors and regarded as biological markers of pan-cancer. The well-known 'Warburg effect' demonstrates that cancer cells prefer aerobic glycolysis even if there is sufficient ambient oxygen. Accumulating evidence suggests that aerobic glycolysis plays a pivotal role in colorectal cancer (CRC) development. However, few studies have examined the relationship of glycolytic gene clusters with prognosis of CRC patients. Here, our aim is to build a glycolysis-associated gene signature as a biomarker for colorectal cancer. The mRNA sequencing and corresponding clinical data were downloaded from TCGA and GEO databases. Gene set enrichment analysis (GSEA) was performed, indicating that four gene clusters were significantly enriched, which revealed the inextricable relationship of CRC with glycolysis. By comparing gene expression of cancer and adjacent samples, 236 genes were identified. Univariate, multivariate, and LASSO Cox regression analyses screened out five prognostic-related genes (ENO3, GPC1, P4HA1, SPAG4, and STC2). Kaplan-Meier curves and receiver operating characteristic curves (ROC, AUC = 0.766) showed that the risk model could become an effective prognostic indicator (P < 0.001). Multivariate Cox analysis also revealed that this risk model is independent of age and TNM stages. We further validated this risk model in external cohorts (GES38832 and GSE39582), showing these five glycolytic genes could emerge as reliable predictors for CRC patients' outcomes. Lastly, based on five genes and risk score, we construct a nomogram model assessed by C-index (0.7905) and calibration plot. In conclusion, we highlighted the clinical significance of glycolysis in CRC and constructed a glycolysis-related prognostic model, providing a promising target for glycolysis regulation in CRC.
Copyright © 2021 Zhu, Wang, Bai, Wang, Hao, Zhang and Li.

Entities:  

Keywords:  ENO3; GPC1; P4HA1; SPAG4; STC2; colorectal cancer; glycolytic gene; prognosis analysis

Year:  2021        PMID: 33747908      PMCID: PMC7969881          DOI: 10.3389/fonc.2021.588811

Source DB:  PubMed          Journal:  Front Oncol        ISSN: 2234-943X            Impact factor:   6.244


  13 in total

1.  ENO3 promotes colorectal cancer progression by enhancing cell glycolysis.

Authors:  Jingyu Chen; Zizhen Zhang; Jiaojiao Ni; Jiawei Sun; Fangyu Ju; Zhuo Wang; Liangjing Wang; Meng Xue
Journal:  Med Oncol       Date:  2022-04-28       Impact factor: 3.738

2.  GPC1 promotes the growth and migration of colorectal cancer cells through regulating the TGF-β1/SMAD2 signaling pathway.

Authors:  Fei Lu; Shuran Chen; Weijun Shi; Xu Su; Huazhang Wu; Mulin Liu
Journal:  PLoS One       Date:  2022-06-07       Impact factor: 3.752

3.  Exploring the Interplay between Metabolism and Tumor Microenvironment Based on Four Major Metabolism Pathways in Colon Adenocarcinoma.

Authors:  Xiaofang Qiao; Guangmei Zhang; Yajie Xiao; Xiaoli Cui; Zhikun Zhao; Dongfang Wu; Xuefei Liu
Journal:  J Oncol       Date:  2022-06-14       Impact factor: 4.501

4.  The Metabolic Landscape in Osteoarthritis.

Authors:  Xiaoxin Wu; Xiwei Fan; Ross Crawford; Yin Xiao; Indira Prasadam
Journal:  Aging Dis       Date:  2022-07-11       Impact factor: 9.968

5.  A novel signature model based on mitochondrial-related genes for predicting survival of colon adenocarcinoma.

Authors:  Hongli Gao; Fei Xing
Journal:  BMC Med Inform Decis Mak       Date:  2022-10-22       Impact factor: 3.298

6.  Identification and verification of a glycolysis-related gene signature for gastric cancer.

Authors:  Yi Liu; Min Wu; Jian Cao; Yaning Zhu; Yu Ma; Yansong Pu; Xueping Huo; Jianhua Wang
Journal:  Ann Transl Med       Date:  2022-09

7.  ENO3 Inhibits Growth and Metastasis of Hepatocellular Carcinoma via Wnt/β-Catenin Signaling Pathway.

Authors:  Honglei Cui; Danfeng Guo; Xiaodan Zhang; Yaohua Zhu; Zhihui Wang; Yang Jin; Wenzhi Guo; Shuijun Zhang
Journal:  Front Cell Dev Biol       Date:  2021-12-23

8.  Development of an Aging-Related Gene Signature for Predicting Prognosis, Immunotherapy, and Chemotherapy Benefits in Rectal Cancer.

Authors:  Yangyang Wang; Yan Liu; Chunchao Zhu; Xinyu Zhang; Guodong Li
Journal:  Front Mol Biosci       Date:  2022-01-10

9.  Glycolysis related gene expression signature in predicting prognosis of laryngeal squamous cell carcinoma.

Authors:  Hui-Ching Lau; Yujie Shen; Qiang Huang; Hui-Ying Huang; Liang Zhou
Journal:  Bioengineered       Date:  2021-12       Impact factor: 3.269

10.  Human sperm-associated antigen 4 as a potential prognostic biomarker of lung squamous cell carcinoma.

Authors:  Yongheng Wang; Yao Tang; Jianhui Li; Danfang Wang; Wenhan Li
Journal:  J Int Med Res       Date:  2021-07       Impact factor: 1.671

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.