Literature DB >> 33747610

Breast Cancer Detection with Low-dimension Ordered Orthogonal Projection in Terahertz Imaging.

Tanny Chavez1, Nagma Vohra1, Jingxian Wu1, Keith Bailey2, Magda El-Shenawee1.   

Abstract

This paper proposes a new dimension reduction algorithm based on low-dimension ordered orthogonal projection (LOOP), which is used for cancer detection with terahertz (THz) images of freshly excised human breast cancer tissues. A THz image can be represented by a data cube with each pixel containing a high dimension spectrum vector covering several THz frequencies, where each frequency represents a different dimension in the vector. The proposed algorithm projects the high-dimension spectrum vector of each pixel within the THz image into a low-dimension subspace that contains the majority of the unique features embedded in the image. The low-dimension subspace is constructed by sequentially identifying its orthonormal basis vectors, such that each newly chosen basis vector represents the most unique information not contained by existing basis vectors. A multivariate Gaussian mixture model is used to represent the statistical distributions of the low-dimension feature vectors obtained from the proposed dimension reduction algorithm. The model parameters are iteratively learned by using unsupervised learning methods such as Markov chain Monte Carlo or expectation maximization, and the results are used to classify the various regions within a tumor sample. Experiment results demonstrate that the proposed method achieves apparent performance improvement in human breast cancer tissue over existing approaches such as one-dimension Markov chain Monte Carlo. The results confirm that the dimension reduction algorithm presented in this paper is a promising technique for breast cancer detection with THz images, and the classification results present a good correlation with respect to the histopathology results of the analyzed samples.

Entities:  

Keywords:  Breast cancer; Expectation maximization; Gaussian mixture model; Gibbs sampling; Low-dimension ordered orthogonal projection; Terahertz

Year:  2019        PMID: 33747610      PMCID: PMC7977298          DOI: 10.1109/tthz.2019.2962116

Source DB:  PubMed          Journal:  IEEE Trans Terahertz Sci Technol        ISSN: 2156-342X            Impact factor:   3.274


  11 in total

1.  Unsupervised learning applied in MER and ECG signals through Gaussians mixtures with the Expectation-Maximization algorithm and Variational Bayesian Inference.

Authors:  Hernán Darío Vargas Cardona; Álvaro Ángel Orozco; Mauricio A Álvarez
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2013

2.  Inspecting human colon adenocarcinoma cell lines by using terahertz time-domain reflection spectroscopy.

Authors:  Yuqi Cao; Jiani Chen; Pingjie Huang; Weiting Ge; Dibo Hou; Guangxin Zhang
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2018-12-11       Impact factor: 4.098

3.  Concentration analysis of breast tissue phantoms with terahertz spectroscopy.

Authors:  Bao C Q Truong; Anthony J Fitzgerald; Shuting Fan; Vincent P Wallace
Journal:  Biomed Opt Express       Date:  2018-02-26       Impact factor: 3.732

4.  Diagnosis of oral lichen planus from analysis of saliva samples using terahertz time-domain spectroscopy and chemometrics.

Authors:  Yury Kistenev; Alexey Borisov; Maria Titarenko; Olga Baydik; Alexander Shapovalov
Journal:  J Biomed Opt       Date:  2018-04       Impact factor: 3.170

5.  Automatic evaluation of traumatic brain injury based on terahertz imaging with machine learning.

Authors:  Jia Shi; Yuye Wang; Tunan Chen; Degang Xu; Hengli Zhao; Linyu Chen; Chao Yan; Longhuang Tang; Yixin He; Hua Feng; Jianquan Yao
Journal:  Opt Express       Date:  2018-03-05       Impact factor: 3.894

6.  Pulsed terahertz imaging of breast cancer in freshly excised murine tumors.

Authors:  Tyler Bowman; Tanny Chavez; Kamrul Khan; Jingxian Wu; Avishek Chakraborty; Narasimhan Rajaram; Keith Bailey; Magda El-Shenawee
Journal:  J Biomed Opt       Date:  2018-02       Impact factor: 3.170

7.  Impact of the SSO-ASTRO Margin Guideline on Rates of Re-excision After Lumpectomy for Breast Cancer: A Meta-analysis.

Authors:  Liska Havel; Himani Naik; Luis Ramirez; Monica Morrow; Jeffrey Landercasper
Journal:  Ann Surg Oncol       Date:  2019-02-21       Impact factor: 5.344

8.  Assessment of Terahertz Imaging for Excised Breast Cancer Tumors with Image Morphing.

Authors:  Tanny Chavez; Tyler Bowman; Jingxian Wu; Keith Bailey; Magda El-Shenawee
Journal:  J Infrared Millim Terahertz Waves       Date:  2018-08-09       Impact factor: 1.768

9.  Terahertz tomographic imaging of freshly excised human breast tissues.

Authors:  Tyler Bowman; Nagma Vohra; Keith Bailey; Magda El-Shenawee
Journal:  J Med Imaging (Bellingham)       Date:  2019-05-14

10.  Cancer detection in excised breast tumors using terahertz imaging and spectroscopy.

Authors:  Magda El-Shenawee; Nagma Vohra; Tyler Bowman; Keith Bailey
Journal:  Biomed Spectrosc Imaging       Date:  2019-07-09
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  2 in total

1.  Hyperspectral terahertz imaging and optical clearance for cancer classification in breast tumor surgical specimen.

Authors:  Nagma Vohra; Haoyan Liu; Alexander H Nelson; Keith Bailey; Magda El-Shenawee
Journal:  J Med Imaging (Bellingham)       Date:  2022-01-12

2.  Mammary tumors in Sprague Dawley rats induced by N-ethyl-N-nitrosourea for evaluating terahertz imaging of breast cancer.

Authors:  Nagma Vohra; Tanny Chavez; Joel R Troncoso; Narasimhan Rajaram; Jingxian Wu; Patricia N Coan; Todd A Jackson; Keith Bailey; Magda El-Shenawee
Journal:  J Med Imaging (Bellingham)       Date:  2021-04-26
  2 in total

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