Literature DB >> 33742448

COMBINE: a coalesced mammal database of intrinsic and extrinsic traits.

Carmen D Soria1, Michela Pacifici2, Moreno Di Marco2, Sarah M Stephen3, Carlo Rondinini1.   

Abstract

The use of species' traits in macroecological analyses has gained popularity in the last decade, becoming an important tool to understand global biodiversity patterns. Currently, trait data can be found across a wide variety of data sets included in websites, articles, and books, each one with its own taxonomic classification, set of traits, and data management methodology. Mammals, in particular, are among the most studied taxa, with large sources of trait information readily available. To facilitate the use of these data, we did an extensive review of published mammal trait data sources between 1999 and May 2020 and produced COMBINE: a COalesced Mammal dataBase of INtrinsic and Extrinsic traits. Our aim was to create a taxonomically integrated database of mammal traits that maximized trait number and coverage without compromising data quality. COMBINE contains information on 54 traits for 6,234 extant and recently extinct mammal species, including information on morphology, reproduction, diet, biogeography, life habit, phenology, behavior, home range, and density. Additionally, we calculated other relevant traits such as habitat and altitudinal breadths for all species and dispersal for terrestrial non-volant species. All data are compatible with the taxonomies of the IUCN Red List v. 2020-2 and PHYLACINE v. 1.2. Missing data were adequately flagged and imputed for non-biogeographical traits with 20% or more data available. We obtained full data sets for 21 traits such as female maturity, litter size, maximum longevity, trophic level, and dispersal, providing imputation performance statistics for all. This data set will be especially useful for those interested in including species' traits in large-scale ecological and conservation analyses. There are no copyright or proprietary restrictions; we request citation of this publication and all relevant underlying data sources (found in Data S1: trait_data_sources.csv), upon using these data. © The Authors. Ecology
© 2021 The Ecological Society of America.

Entities:  

Keywords:  body size; comparative analyses; diet; hibernation; life history; longevity; macroecology; mammals; mass; sexual maturity; traits

Mesh:

Year:  2021        PMID: 33742448     DOI: 10.1002/ecy.3344

Source DB:  PubMed          Journal:  Ecology        ISSN: 0012-9658            Impact factor:   5.499


  3 in total

Review 1.  Introduction, spread, and impacts of invasive alien mammal species in Europe.

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Journal:  Mamm Rev       Date:  2021-11-23       Impact factor: 5.373

Review 2.  The genotypes and phenotypes of missense mutations in the proline domain of the p53 protein.

Authors:  David Hoyos; Benjamin Greenbaum; Arnold J Levine
Journal:  Cell Death Differ       Date:  2022-04-05       Impact factor: 12.067

3.  A solution to the challenges of interdisciplinary aggregation and use of specimen-level trait data.

Authors:  Meghan A Balk; John Deck; Kitty F Emery; Ramona L Walls; Dana Reuter; Raphael LaFrance; Joaquín Arroyo-Cabrales; Paul Barrett; Jessica Blois; Arianne Boileau; Laura Brenskelle; Nicole R Cannarozzi; J Alberto Cruz; Liliana M Dávalos; Noé U de la Sancha; Prasiddhi Gyawali; Maggie M Hantak; Samantha Hopkins; Brooks Kohli; Jessica N King; Michelle S Koo; A Michelle Lawing; Helena Machado; Samantha M McCrane; Bryan McLean; Michèle E Morgan; Suzanne Pilaar Birch; Denne Reed; Elizabeth J Reitz; Neeka Sewnath; Nathan S Upham; Amelia Villaseñor; Laurel Yohe; Edward B Davis; Robert P Guralnick
Journal:  iScience       Date:  2022-09-13
  3 in total

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