Literature DB >> 33742080

Lin28, a major translation reprogramming factor, gains access to YB-1-packaged mRNA through its cold-shock domain.

Anastasiia Samsonova1, Krystel El Hage1, Bénédicte Desforges1, Vandana Joshi1, Marie-Jeanne Clément1, Guillaume Lambert1, Hélène Henrie2, Nicolas Babault2, Pierrick Craveur2, Rachid C Maroun1, Emilie Steiner1, Ahmed Bouhss1, Alexandre Maucuer1, Dmitry N Lyabin3, Lev P Ovchinnikov3, Loic Hamon1, David Pastré4.   

Abstract

The RNA-binding protein Lin28 (Lin28a) is an important pluripotency factor that reprograms translation and promotes cancer progression. Although Lin28 blocks let-7 microRNA maturation, Lin28 also binds to a large set of cytoplasmic mRNAs directly. However, how Lin28 regulates the processing of many mRNAs to reprogram global translation remains unknown. We show here, using a structural and cellular approach, a mixing of Lin28 with YB-1 (YBX1) in the presence of mRNA owing to their cold-shock domain, a conserved β-barrel structure that binds to ssRNA cooperatively. In contrast, the other RNA binding-proteins without cold-shock domains tested, HuR, G3BP-1, FUS and LARP-6, did not mix with YB-1. Given that YB-1 is the core component of dormant mRNPs, a model in which Lin28 gains access to mRNPs through its co-association with YB-1 to mRNA may provide a means for Lin28 to reprogram translation. We anticipate that the translational plasticity provided by mRNPs may contribute to Lin28 functions in development and adaptation of cancer cells to an adverse environment.

Entities:  

Year:  2021        PMID: 33742080      PMCID: PMC7979924          DOI: 10.1038/s42003-021-01862-3

Source DB:  PubMed          Journal:  Commun Biol        ISSN: 2399-3642


  57 in total

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Journal:  J Chem Theory Comput       Date:  2008-01       Impact factor: 6.006

2.  unr, a cellular cytoplasmic RNA-binding protein with five cold-shock domains, is required for internal initiation of translation of human rhinovirus RNA.

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Journal:  Genes Dev       Date:  1999-02-15       Impact factor: 11.361

3.  Lin28-let7 modulates radiosensitivity of human cancer cells with activation of K-Ras.

Authors:  Jee-Sun Oh; Jae-Jin Kim; Ju-Yeon Byun; In-Ah Kim
Journal:  Int J Radiat Oncol Biol Phys       Date:  2010-01-01       Impact factor: 7.038

4.  Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells.

Authors:  Liying Yan; Mingyu Yang; Hongshan Guo; Lu Yang; Jun Wu; Rong Li; Ping Liu; Ying Lian; Xiaoying Zheng; Jie Yan; Jin Huang; Ming Li; Xinglong Wu; Lu Wen; Kaiqin Lao; Ruiqiang Li; Jie Qiao; Fuchou Tang
Journal:  Nat Struct Mol Biol       Date:  2013-08-11       Impact factor: 15.369

5.  A mouse Y box protein, MSY1, is associated with paternal mRNA in spermatocytes.

Authors:  S R Tafuri; M Familari; A P Wolffe
Journal:  J Biol Chem       Date:  1993-06-05       Impact factor: 5.157

6.  Lin28 promotes transformation and is associated with advanced human malignancies.

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Journal:  Nat Genet       Date:  2009-05-31       Impact factor: 38.330

7.  A role for Lin28 in primordial germ-cell development and germ-cell malignancy.

Authors:  Jason A West; Srinivas R Viswanathan; Akiko Yabuuchi; Kerianne Cunniff; Ayumu Takeuchi; In-Hyun Park; Julia E Sero; Hao Zhu; Antonio Perez-Atayde; A Lindsay Frazier; M Azim Surani; George Q Daley
Journal:  Nature       Date:  2009-07-05       Impact factor: 49.962

8.  Regulation of mRNA translation during mitosis.

Authors:  Marvin E Tanenbaum; Noam Stern-Ginossar; Jonathan S Weissman; Ronald D Vale
Journal:  Elife       Date:  2015-08-25       Impact factor: 8.140

9.  Probing protein interactions in living mammalian cells on a microtubule bench.

Authors:  Mirela Boca; Dmitry A Kretov; Bénédicte Desforges; Alix Mephon-Gaspard; Patrick A Curmi; David Pastré
Journal:  Sci Rep       Date:  2015-11-27       Impact factor: 4.379

10.  YB-1, an abundant core mRNA-binding protein, has the capacity to form an RNA nucleoprotein filament: a structural analysis.

Authors:  Dmitry A Kretov; Marie-Jeanne Clément; Guillaume Lambert; Dominique Durand; Dmitry N Lyabin; Guillaume Bollot; Cyril Bauvais; Anastasiia Samsonova; Karina Budkina; Rachid C Maroun; Loic Hamon; Ahmed Bouhss; Ewen Lescop; Flavio Toma; Patrick A Curmi; Alexandre Maucuer; Lev P Ovchinnikov; David Pastré
Journal:  Nucleic Acids Res       Date:  2019-04-08       Impact factor: 16.971

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  2 in total

1.  RNANetMotif: Identifying sequence-structure RNA network motifs in RNA-protein binding sites.

Authors:  Hongli Ma; Han Wen; Zhiyuan Xue; Guojun Li; Zhaolei Zhang
Journal:  PLoS Comput Biol       Date:  2022-07-12       Impact factor: 4.779

2.  YB-1 unwinds mRNA secondary structures in vitro and negatively regulates stress granule assembly in HeLa cells.

Authors:  Karina Budkina; Krystel El Hage; Marie-Jeanne Clément; Bénédicte Desforges; Ahmed Bouhss; Vandana Joshi; Alexandre Maucuer; Loic Hamon; Lev P Ovchinnikov; Dmitry N Lyabin; David Pastré
Journal:  Nucleic Acids Res       Date:  2021-09-27       Impact factor: 16.971

  2 in total

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