Literature DB >> 33738066

Carbamate and N-Pyrimidine Mitigate Amide Hydrolysis: Structure-Based Drug Design of Tetrahydroquinoline IDO1 Inhibitors.

Derun Li1, Yongqi Deng1, Abdelghani Achab1, Indu Bharathan1, Brett Andrew Hopkins1, Wensheng Yu1, Hongjun Zhang1, Sulagna Sanyal1, Qinglin Pu1, Hua Zhou1, Kun Liu1, Jongwon Lim1, Xavier Fradera1, Charles A Lesburg1, Alfred Lammens2, Theodore A Martinot1, Ryan D Cohen3, Amy C Doty1, Heidi Ferguson1, Elliott B Nickbarg1, Mangeng Cheng1, Peter Spacciapoli1, Prasanthi Geda1, Xuelei Song1, Nadya Smotrov1, Pravien Abeywickrema1, Christine Andrews1, Chad Chamberlin1, Omar Mabrouk1, Patrick Curran1, Matthew Richards1, Peter Saradjian1, J Richard Miller1, Ian Knemeyer1, Karin M Otte1, Stella Vincent1, Nunzio Sciammetta1, Alexander Pasternak1, David Jonathan Bennett1, Yongxin Han1.   

Abstract

Indoleamine-2,3-dioxygenase-1 (IDO1) has emerged as an attractive target for cancer immunotherapy. An automated ligand identification system screen afforded the tetrahydroquinoline class of novel IDO1 inhibitors. Potency and pharmacokinetic (PK) were key issues with this class of compounds. Structure-based drug design and strategic incorporation of polarity enabled the rapid improvement on potency, solubility, and oxidative metabolic stability. Metabolite identification studies revealed that amide hydrolysis in the D-pocket was the key clearance mechanism for this class. Strategic survey of amide isosteres revealed that carbamates and N-pyrimidines, which maintained exquisite potencies, mitigated the amide hydrolysis issue and led to an improved rat PK profile. The lead compound 28 is a potent IDO1 inhibitor, with clean off-target profiles and the potential for quaque die dosing in humans.
© 2021 American Chemical Society.

Entities:  

Year:  2021        PMID: 33738066      PMCID: PMC7957919          DOI: 10.1021/acsmedchemlett.0c00525

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  29 in total

Review 1.  Medicinal chemistry of hERG optimizations: Highlights and hang-ups.

Authors:  Craig Jamieson; Elizabeth M Moir; Zoran Rankovic; Grant Wishart
Journal:  J Med Chem       Date:  2006-08-24       Impact factor: 7.446

2.  Discovery of Imidazoisoindole Derivatives as Highly Potent and Orally Active Indoleamine-2,3-dioxygenase Inhibitors.

Authors:  Wangyang Tu; Fanglong Yang; Guoji Xu; Jiangtao Chi; Zhiwei Liu; Wei Peng; Bing Hu; Lei Zhang; Hong Wan; Nan Yu; Fangfang Jin; Qiyue Hu; Lianshan Zhang; Feng He; Weikang Tao
Journal:  ACS Med Chem Lett       Date:  2019-06-03       Impact factor: 4.345

Review 3.  Affinity selection-mass spectrometry screening techniques for small molecule drug discovery.

Authors:  D Allen Annis; Elliot Nickbarg; Xianshu Yang; Michael R Ziebell; Charles E Whitehurst
Journal:  Curr Opin Chem Biol       Date:  2007-10-10       Impact factor: 8.822

4.  The many roles for fluorine in medicinal chemistry.

Authors:  William K Hagmann
Journal:  J Med Chem       Date:  2008-06-21       Impact factor: 7.446

5.  Optimization of Pharmacokinetics through Manipulation of Physicochemical Properties in a Series of HCV Inhibitors.

Authors:  Scott E Lazerwith; Gina Bahador; Eda Canales; Guofeng Cheng; Lee Chong; Michael O Clarke; Edward Doerffler; Eugene J Eisenberg; Jaclyn Hayes; Bing Lu; Qi Liu; Mike Matles; Michael Mertzman; Michael L Mitchell; Philip Morganelli; Bernard P Murray; Margaret Robinson; Robert G Strickley; Megan Tessler; Neeraj Tirunagari; Jianhong Wang; Yujin Wang; Jennifer R Zhang; Xubin Zheng; Weidong Zhong; William J Watkins
Journal:  ACS Med Chem Lett       Date:  2011-08-08       Impact factor: 4.345

Review 6.  Host indoleamine 2,3-dioxygenase: contribution to systemic acquired tumor tolerance.

Authors:  Theodore S Johnson; David H Munn
Journal:  Immunol Invest       Date:  2012       Impact factor: 3.657

7.  An endogenous tumour-promoting ligand of the human aryl hydrocarbon receptor.

Authors:  Christiane A Opitz; Ulrike M Litzenburger; Felix Sahm; Martina Ott; Isabel Tritschler; Saskia Trump; Theresa Schumacher; Leonie Jestaedt; Dieter Schrenk; Michael Weller; Manfred Jugold; Gilles J Guillemin; Christine L Miller; Christian Lutz; Bernhard Radlwimmer; Irina Lehmann; Andreas von Deimling; Wolfgang Wick; Michael Platten
Journal:  Nature       Date:  2011-10-05       Impact factor: 49.962

Review 8.  Applications of Fluorine in Medicinal Chemistry.

Authors:  Eric P Gillis; Kyle J Eastman; Matthew D Hill; David J Donnelly; Nicholas A Meanwell
Journal:  J Med Chem       Date:  2015-07-22       Impact factor: 7.446

9.  Discovery of Clinical Candidate (1R,4r)-4-((R)-2-((S)-6-Fluoro-5H-imidazo[5,1-a]isoindol-5-yl)-1-hydroxyethyl)cyclohexan-1-ol (Navoximod), a Potent and Selective Inhibitor of Indoleamine 2,3-Dioxygenase 1.

Authors:  Sanjeev Kumar; Jesse P Waldo; Firoz A Jaipuri; Agnieszka Marcinowicz; Clarissa Van Allen; James Adams; Tanay Kesharwani; Xiaoxia Zhang; Richard Metz; Angela J Oh; Seth F Harris; Mario R Mautino
Journal:  J Med Chem       Date:  2019-07-02       Impact factor: 7.446

10.  Immune-modulating enzyme indoleamine 2,3-dioxygenase is effectively inhibited by targeting its apo-form.

Authors:  Micah T Nelp; Patrick A Kates; John T Hunt; John A Newitt; Aaron Balog; Derrick Maley; Xiao Zhu; Lynn Abell; Alban Allentoff; Robert Borzilleri; Hal A Lewis; Zeyu Lin; Steven P Seitz; Chunhong Yan; John T Groves
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-12       Impact factor: 11.205

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  3 in total

1.  Utilization of Metabolite Identification and Structural Data to Guide Design of Low-Dose IDO1 Inhibitors.

Authors:  Brett Hopkins; Hongjun Zhang; Indu Bharathan; Derun Li; Qinglin Pu; Hua Zhou; Theodore A Martinot; Xavier Fradera; Alfred Lammens; Charles A Lesburg; Ryan D Cohen; Jeanine Ballard; Ian Knemeyer; Karin Otte; Stella Vincent; J Richard Miller; Nicolas Solban; Mangeng Cheng; Prasanthi Geda; Nadya Smotrov; Xuelei Song; David Jonathan Bennett; Yongxin Han
Journal:  ACS Med Chem Lett       Date:  2021-08-18       Impact factor: 4.632

2.  Temporary Intermediates of L-Trp Along the Reaction Pathway of Human Indoleamine 2,3-Dioxygenase 1 and Identification of an Exo Site.

Authors:  Manon Mirgaux; Laurence Leherte; Johan Wouters
Journal:  Int J Tryptophan Res       Date:  2021-12-15

3.  The [1,2,4]Triazolo[4,3-a]pyridine as a New Player in the Field of IDO1 Catalytic Holo-Inhibitors.

Authors:  Silvia Fallarini; Irene P Bhela; Silvio Aprile; Enza Torre; Alice Ranza; Elena Orecchini; Eleonora Panfili; Maria T Pallotta; Alberto Massarotti; Marta Serafini; Tracey Pirali
Journal:  ChemMedChem       Date:  2021-08-27       Impact factor: 3.540

  3 in total

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