Literature DB >> 33737353

Genome Sequence of an Alkaliphilus Species Isolated from Historically Contaminated Sediments of the Gulf of Naples (Mediterranean Sea).

Filippo Dell'Anno1, Leonardo Joaquim van Zyl2, Marla Trindade2, Christophe Brunet3, Antonio Dell'Anno4, Adrianna Ianora3, Clementina Sansone3.   

Abstract

Here, we report the draft genome sequence of a metagenome-assembled genome (MAG) of a new Alkaliphilus bacterium, NP8, of the Clostridiaceae family. This bacterium was isolated from polluted sediment collected from an abandoned industrial site located in the Gulf of Naples (Mediterranean Sea) as part of a microbial consortium.
Copyright © 2021 Dell’Anno et al.

Entities:  

Year:  2021        PMID： 33737353      PMCID： PMC7975871          DOI： 10.1128/MRA.00060-21

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  8 in total

1.  The impact of the Bagnoli industrial site (Naples, Italy) on sea-bottom environment. Chemical and textural features of sediments and the related response of benthic foraminifera.

Authors:  Elena Romano; Luisa Bergamin; Antonella Ausili; Giancarlo Pierfranceschi; Chiara Maggi; Giulio Sesta; Massimo Gabellini
Journal:  Mar Pollut Bull       Date:  2009-10-17       Impact factor: 5.553

2.  Extremely high alkaline protease from a deep-subsurface bacterium, Alkaliphilus transvaalensis.

Authors:  Tohru Kobayashi; Jie Lu; Zhijun Li; Vo Si Hung; Atsushi Kurata; Yuji Hatada; Ken Takai; Susumu Ito; Koki Horikoshi
Journal:  Appl Microbiol Biotechnol       Date:  2007-01-11       Impact factor: 4.813

3.  CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.

Authors:  Donovan H Parks; Michael Imelfort; Connor T Skennerton; Philip Hugenholtz; Gene W Tyson
Journal:  Genome Res       Date:  2015-05-14       Impact factor: 9.043

4.  Complete Genome Sequence of Alkaliphilus metalliredigens Strain QYMF, an Alkaliphilic and Metal-Reducing Bacterium Isolated from Borax-Contaminated Leachate Ponds.

Authors:  C Hwang; A Copeland; S Lucas; A Lapidus; K Barry; J C Detter; T Glavina Del Rio; N Hammon; S Israni; E Dalin; H Tice; S Pitluck; O Chertkov; T Brettin; D Bruce; C Han; J Schmutz; F Larimer; M L Land; L Hauser; N Kyrpides; N Mikhailova; Q Ye; J Zhou; P Richardson; M W Fields
Journal:  Genome Announc       Date:  2016-11-03

5.  MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes.

Authors:  David Vallenet; Alexandra Calteau; Stéphane Cruveiller; Mathieu Gachet; Aurélie Lajus; Adrien Josso; Jonathan Mercier; Alexandre Renaux; Johan Rollin; Zoe Rouy; David Roche; Claude Scarpelli; Claudine Médigue
Journal:  Nucleic Acids Res       Date:  2016-11-29       Impact factor: 16.971

Review 6.  Antioxidant responses and cellular adjustments to oxidative stress.

Authors:  Cristina Espinosa-Diez; Verónica Miguel; Daniela Mennerich; Thomas Kietzmann; Patricia Sánchez-Pérez; Susana Cadenas; Santiago Lamas
Journal:  Redox Biol       Date:  2015-07-21       Impact factor: 11.799

7.  The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).

Authors:  Ross Overbeek; Robert Olson; Gordon D Pusch; Gary J Olsen; James J Davis; Terry Disz; Robert A Edwards; Svetlana Gerdes; Bruce Parrello; Maulik Shukla; Veronika Vonstein; Alice R Wattam; Fangfang Xia; Rick Stevens
Journal:  Nucleic Acids Res       Date:  2013-11-29       Impact factor: 16.971

8.  Accurate binning of metagenomic contigs via automated clustering sequences using information of genomic signatures and marker genes.

Authors:  Hsin-Hung Lin; Yu-Chieh Liao
Journal:  Sci Rep       Date:  2016-04-12       Impact factor: 4.379
  8 in total

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