Literature DB >> 33736853

Methods for ensuring the highest DNA concentration and yield in future and retrospective trace DNA extracts.

Katherine Dilley1, Felicity Pagan2, Brendan Chapman3.   

Abstract

In forensic laboratories, increased extraction efficiency of trace evidence is paramount because analytical success is intrinsically dependent on the quantity of DNA recovered. Moreover, highly concentrated nucleic acids are vital for effective downstream analysis and high quality results. This study investigated the efficiency of extraction with the Qiagen® QIAamp® DNA Investigator kit, and explored improvements to the methodology that would maximise the recovery of low concentration forensic samples. Controlled amounts of starting cellular material were used to mimic trace (or low level) DNA deposits prior to DNA extraction with the Investigator kit. Addition of the provided carrier RNA along with conducting two successive elutions of 50 µL improved the net recovery of DNA to 95%. Concentration with centrifugal filters post-extraction were able to concentrate DNA but a large net loss was observed. For the concentration of historic, retrospectively extracted DNA, centrifugal methods are able to concentrate DNA extracts previously too dilute for analysis. These concentrated volumes, however are small, allowing for minimal downstream analysis attempts before the sample is exhausted.
Copyright © 2020 The Chartered Society of Forensic Sciences. All rights reserved.

Entities:  

Keywords:  Centrifugal filters; Cold case; Elution volume; Extraction efficiency; QIAamp DNA Investigator; qPCR

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Year:  2020        PMID: 33736853     DOI: 10.1016/j.scijus.2020.11.005

Source DB:  PubMed          Journal:  Sci Justice        ISSN: 1355-0306            Impact factor:   2.124


  1 in total

1.  Comparison Analysis of Different DNA Extraction Methods on Suitability for Long-Read Metagenomic Nanopore Sequencing.

Authors:  Lei Zhang; Ting Chen; Ye Wang; Shengwei Zhang; Qingyu Lv; Decong Kong; Hua Jiang; Yuling Zheng; Yuhao Ren; Wenhua Huang; Peng Liu; Yongqiang Jiang
Journal:  Front Cell Infect Microbiol       Date:  2022-06-28       Impact factor: 6.073

  1 in total

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