Literature DB >> 33732771

Efficient Transient Gene Knock-down in Tobacco Plants Using Carbon Nanocarriers.

Gozde S Demirer1, Markita P Landry1,2,3,4.   

Abstract

Gene knock-down in plants is a useful approach to study genotype-phenotype relationships, render disease resistance to crops, and enable efficient biosynthesis of molecules in plants. Small interfering RNA (siRNA)-mediated gene silencing is one of the most common ways to achieve gene knock-down in plants. Traditionally, siRNA is delivered into intact plant cells by coding the siRNA sequences into DNA vectors, which are then delivered through viral and/or bacterial methods. In this protocol, we provide an alternative direct delivery method of siRNA molecules into intact plant cells for efficient transient gene knock-down in model tobacco plant, Nicotiana benthamiana, leaves. Our approach uses one dimensional carbon-based nanomaterials, single-walled carbon nanotubes (SWNTs), to deliver siRNA, and does not rely on viral/bacterial delivery. The distinct advantages of our method are i) there is no need for DNA coding of siRNA sequences, ii) this abiotic method could work in a broader range of plant species than biotic methods, and iii) there are fewer regulatory complications when using abiotic delivery methods, whereby gene silencing is transient without permanent modification of the plant genome. Graphic abstract.
Copyright © 2021 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Carbon nanotubes; Gene knock-down; Nanomaterials; Nicotiana benthamiana; Plant gene silencing; RNA interference; Single-walled carbon nanotubes (SWNT); siRNA delivery

Year:  2021        PMID: 33732771      PMCID: PMC7953349          DOI: 10.21769/BioProtoc.3897

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  12 in total

Review 1.  Applications and advantages of virus-induced gene silencing for gene function studies in plants.

Authors:  Tessa M Burch-Smith; Jeffrey C Anderson; Gregory B Martin; S P Dinesh-Kumar
Journal:  Plant J       Date:  2004-09       Impact factor: 6.417

2.  High aspect ratio nanomaterials enable delivery of functional genetic material without DNA integration in mature plants.

Authors:  Gozde S Demirer; Huan Zhang; Juliana L Matos; Natalie S Goh; Francis J Cunningham; Younghun Sung; Roger Chang; Abhishek J Aditham; Linda Chio; Myeong-Je Cho; Brian Staskawicz; Markita P Landry
Journal:  Nat Nanotechnol       Date:  2019-02-25       Impact factor: 39.213

3.  Flavonoid genes in petunia: addition of a limited number of gene copies may lead to a suppression of gene expression.

Authors:  A R van der Krol; L A Mur; M Beld; J N Mol; A R Stuitje
Journal:  Plant Cell       Date:  1990-04       Impact factor: 11.277

Review 4.  Genome Engineering and Agriculture: Opportunities and Challenges.

Authors:  Nicholas J Baltes; Javier Gil-Humanes; Daniel F Voytas
Journal:  Prog Mol Biol Transl Sci       Date:  2017-05-03       Impact factor: 3.622

5.  Engineering Molecular Recognition with Bio-mimetic Polymers on Single Walled Carbon Nanotubes.

Authors:  Jackson T Del Bonis-O'Donnell; Abraham Beyene; Linda Chio; Gözde Demirer; Darwin Yang; Markita P Landry
Journal:  J Vis Exp       Date:  2017-01-10       Impact factor: 1.355

6.  Repair of thalassemic human beta-globin mRNA in mammalian cells by antisense oligonucleotides.

Authors:  H Sierakowska; M J Sambade; S Agrawal; R Kole
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-12       Impact factor: 11.205

7.  Carbon nanotube-mediated DNA delivery without transgene integration in intact plants.

Authors:  Gozde S Demirer; Huan Zhang; Natalie S Goh; Eduardo González-Grandío; Markita P Landry
Journal:  Nat Protoc       Date:  2019-09-18       Impact factor: 13.491

8.  Conjugated polymer nanoparticles for effective siRNA delivery to tobacco BY-2 protoplasts.

Authors:  Asitha T Silva; Alien Nguyen; Changming Ye; Jeanmarie Verchot; Joong Ho Moon
Journal:  BMC Plant Biol       Date:  2010-12-30       Impact factor: 4.215

9.  Carbon nanocarriers deliver siRNA to intact plant cells for efficient gene knockdown.

Authors:  Gozde S Demirer; Huan Zhang; Natalie S Goh; Rebecca L Pinals; Roger Chang; Markita P Landry
Journal:  Sci Adv       Date:  2020-06-24       Impact factor: 14.136

10.  siRNA-Finder (si-Fi) Software for RNAi-Target Design and Off-Target Prediction.

Authors:  Stefanie Lück; Tino Kreszies; Marc Strickert; Patrick Schweizer; Markus Kuhlmann; Dimitar Douchkov
Journal:  Front Plant Sci       Date:  2019-08-15       Impact factor: 5.753

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  1 in total

Review 1.  The Promising Nanovectors for Gene Delivery in Plant Genome Engineering.

Authors:  Heng Zhi; Shengen Zhou; Wenbo Pan; Yun Shang; Zhanghua Zeng; Huawei Zhang
Journal:  Int J Mol Sci       Date:  2022-07-31       Impact factor: 6.208

  1 in total

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