| Literature DB >> 33727755 |
Zhi Zhao1,2, Changfu Huang1,2, Ziyu Huang1,2, Fengjuan Lin2, Qinlin He2, Dan Tao1,2, Nicole Jaffrezic-Renault3, Zhenzhong Guo1.
Abstract
Respiratory viruses are real meene">nace forEntities:
Keywords: Biosensors; COVID-19; Electrochemical; Respiratory viruses; SARS-CoV-2; Virus detection
Year: 2021 PMID: 33727755 PMCID: PMC7952277 DOI: 10.1016/j.trac.2021.116253
Source DB: PubMed Journal: Trends Analyt Chem ISSN: 0165-9936 Impact factor: 12.296
Fig. 1The genome of SARS-CoV, MERS-CoV and SARS-CoV-2, all of which consist of conserved replicase domain (ORF 1ab) (blue). The structural genes (green) S, E, M and N encode the structural proteins: spike (S) protein, envelope (E) protein, membrane (M) protein and nucleocapsid (N) protein, respectively. Different coronaviruses have different accessory genes (orange). Reproduced with permission from Ref. [35].
Fig. 2Schematic description of components and principle for electrochemical biosensors used in detection of respiratory viruses. (ssDNA: Single-stranded DNA.)
Advantages and limitations of common bio-recognition elements applied for respiratory virus detection.
| Type of electrochemical biosensors | bio-recognition elements | Advantages | limitations |
|---|---|---|---|
| Nucleic acids-based | ss-DNA | Detection of ssDNA PCR products, easy to produce and more stable | Limited for gene sequence detection, strict hybridization conditions and expensive |
| Aptamer | Size-smaller, low-cost, more stable, easy-to-produce and of lower immunogenicity | The strict hybridization conditions, long-term SELEX process and sometimes need complex steps | |
| Immunosensors | Monoclonal antibodies (mAb) | More specific than pAb, avoiding the cross reaction | Expensive, instable and complexity-to-synthesis |
| Polyclonal antibodies (pAb) | Less expensive, more epitopes and mass-productive | Instable and easily appearing cross reaction | |
| Antibody single-chain Fv fragments (scFv) | Highly customizable, low variability and smaller size compared with whole antibody | Slow synthesis, lower affinities compared with whole antibodies and can't be produced for small molecules | |
| Others affinity biosensors | Fetuin A | Low-cost, selective and lower limit of detection | Limited to influenza virus |
| Peptides | Easily being designed and prepared | Less specific compared with aptamers and antibodies | |
| Glycans | Storing more code information | Limited to a few viruses, the affinities need to be proved further |
Nucleic acid-based Electrochemical biosensors for respiratory virus detection.
| Type | Virus | Recognition element | Linear range | LOD | Electrochemical method | Ref. |
|---|---|---|---|---|---|---|
| Detection of proteins or whole virus | H1N1 | aptamer | 101 PFU mL−1 – 104 PFU mL−1 | 3.7 PFU mL−1 | DPV | [ |
| H5N1 | DNA probe | 1 pM – 100 nM | HEPES buffer: 1 pM | CV | [ | |
| AIV | anti-AIV NP aptamer | 2 nM – 2 μM | 1.13 nM | CV | [ | |
| H7N9 | DNA tetrahedral probe and ssDNA | 1 pM – 100 nM | 100 fM | amperometry | [ | |
| H5N1 | aptamer | 100 fM – 10 pM | 100 fM | DPV | [ | |
| H1N1 | aptamer against inactivated intact H1N1 | / | 0.3 ng mL−1 | EIS | [ | |
| Detection of PCR ssDNA products | H5N1 | thiolated ssDNA probe | / | RNA transcripts: 10 pM | SWV | [ |
| H5N1 | ssDNA probe | 1–10 pM | 1.39 pM | SWV | [ | |
| Influenza A | DNA probe | 1.0 fM – 1.0 nM | 84 aM | DPV | [ | |
| H1N1 | HA gene specific ssDNA probe | 0.1–400 ng in 6 μL | 0.004 ng in 6 μL | EIS | [ |
Fig. 3A DNA tetrahedral nanostructure-based electrochemical biosensor was developed to detect avian influenza A (H7N9) virus through recognizing a fragment of the hemagglutinin gene sequence. Biotin-labeled (bio)-ssDNA was the bio-recognition element toward targets, which also could combine with avidin-horseradish peroxidase (HRP) probes through biotin-avidin interaction. The DNA hybridization hence was transformed into the redox reaction of TMB (enhanced K-blue substrate) and H2O2. Reproduced with permission from Ref. [66].
Fig. 4Schematic representation of SARS-CoV-2 detection using the electrochemical biosensor. (A) Prepare of premix A and B; (B) Process of electrochemical detection using a smartphone. Reproduced with permission from Ref. [79].
Antibody-based electrochemical biosensors for respiratory virus detection.
| Type | Label | Virus | Recognition element | Linear range | LOD | Assay time | Electrochemical method | Ref |
|---|---|---|---|---|---|---|---|---|
| Label-free | / | H1N1, H3N2 | Anti-M1 antibody | / | 50 fg mL−1 | 0.1 h | EIS | [ |
| / | MERS-CoV, HCoV | Anti-recombinant spike protein S1 antibody | MERS-CoV: 1.0 pg mL−1 | MERS-CoV: 0.001–100 ng mL−1 | 20 min | SWV | [ | |
| / | H5N1 | scFv against HA H5 | The short fragment: 0.6 pg mL−1 | The short fragment: 4.0–20 pg mL−1 | / | SWV | [ | |
| / | H1N1 | mAb | 0.5 PFU mL−1 | 1 - 104 PFU mL−1 | / | Chronoamperometry | [ | |
| / | AIV H7 | H7-mAb and H7-pAb | 1.6 pg mL−1 | 1.6 pg mL−1 – 16 ng mL−1 | / | LSV | [ | |
| / | H1N1 | Goat anti-influenza A antibody | 113 PFU mL−1 | 10 – 104 PFU mL−1 | 30 min | DPV | [ | |
| / | Influenza virus | Anti-M1 antibody | 1 fg mL−1 in saliva buffer | / | 5 min | EIS | [ | |
| / | H5N1, H1N1 | mAb against the HA proteins | H5N1: 9.4 pM | 25–500 pM | 1 min | Chronoamperometry | [ | |
| / | H1N1 | Anti-H1N1 antibody | Phosphate-buffered saline: 26.04 PFU mL−1 | 10–104 PFU mL−1 | / | EIS | [ | |
| Label-based | MNP | H9N2 | Anti-M2 antibody | 8-128 HAU | 8 HAU | 160 s | Chronoamperometry | [ |
| HRP | H1N1, H5N1 and H7N9 | Anti-H1N1, H5N1 and H7N9 antibodies | 1 pg mL−1 – 10 ng mL−1 | 1 pg mL−1 | / | Amperometry | [ | |
| MNP | H5N1 | Anti-H5N1 antibody | 0.0025–0.16 HAU | 0.0022 | / | CV | [ | |
| HRP | H1N1 | Anti-influenza A HA antibody | / | 5 PFU mL−1 for saliva samples | 6 min | EIS | [ | |
| MNP | H7N9 | mAb and biotinylated antibody | 0.011 ng mL−1 | 0.02–50 ng mL−1 | 1.5 h | LSV | [ | |
| Fluorescence MNP | H7N9 | mAb and pAb | 7.8 fg mL−1 | 0.01–1.5 pg mL−1 | / | LSV | [ | |
| MNP | H7N9 | mAb and rabbit | 6.8 pg mL−1 | 0.01–20 ng mL−1 | / | LSV | [ |
Fig. 5Schematic illustration of the microfluidics-integrated electrochemical immunosensing chip coated with RGO, followed by antibody immobilization using EDC/NHS coupling for the detection of influenza virus H1N1. Reproduced with permission from Ref. [88].
Fig. 6(A) Schematic illustration of the strategy used to develop the gold nanoparticle-based chronoamperometric magneto-immunosensor for influenza virus detection. The influenza virus could be recognized by anti-Matrix protein 2 (M2) antibody modified magnetic nanomaterials (MNP) and fetuin decorated Au NPs. (B) Chronoamperometric curves obtained without influenza virus (Allantoic fluid) and with 8; 16; 32; 64 and 128 hemagglutinin Units (HAU) of the virus (upper panel). (C) Diagrams (lower panel) correspond to the response of the magneto immunoassay to various influenza virus titers ranging from 8 HAU to 128 HAU (blue) and to various concentration of non-infected allantoic fluid in 1 M HCl solution (red). SPCE: Screen-printed carbon electrode. Reproduced with permission from Ref. [94].
Fig. 7Strategy for detection of influenza virus using an electrosensitive peptide ligand. Reproduced with permission from Ref. [106].