| Literature DB >> 33723522 |
Gunnar Gottschalk1, Konstance Knox2, Avik Roy1.
Abstract
Upregulation of Angiotensin Converting Enzyme-2 (ACE2) was frequently observed in patients with lung cancer. Interestingly, our recent study revealed that the same ACE2 receptor was also strongly upregulated in lungs during SARS-CoV2 infection. Therefore, it is possible that the upregulated expression of ACE2 in lung tumors might increase the susceptibility to COVID-19 infection in lung cancer patients. However, the molecular mechanism for the regulation of ACE2 is known neither in lung tumors nor in COVID-19. Under this review, we attempt to identify transcription factors (TFs) in the promoter of ACE2 that promote the expression of ACE2 both in COVID-19 infection and lung cancer. This review would decipher the molecular role of ACE2 in the upscaled fatality of lung cancer patients suffering from COVID-19.Entities:
Keywords: ACE2; ACE2, Angiotensin Converting Enzyme 2; COVID-19; HBV, Hepatitis B virus; HCV, Hepatitis C virus; HSV, Herpes Simplex Virus; Lung cancer; RAS, Renin Angiotensin System; SARS-CoV2; STAT, signal transducer and activator of transcription; STAT3
Year: 2021 PMID: 33723522 PMCID: PMC7946539 DOI: 10.1016/j.genrep.2021.101077
Source DB: PubMed Journal: Gene Rep ISSN: 2452-0144
Promoter analysis of ACE-2. Human Promoter sequence of ACE2 was derived from NCBI reference sequence ID: NG_068141. Promoter analysis was performed in MatInspector application of Genomatix gene analysis tool. Promoter length is 1947 base pairs (bp). Start and end numbers were calculated considering the start bp of open reading frame as 0. Core bases of the sequence were shown in block letters and possible biological functions were listed in the last column.
| Transcription factor | Start | End | Match factor | ResponseElement | Function |
|---|---|---|---|---|---|
| BCL6 | −1946 | −1930 | 0.969 | ggtTTCCtggaatgtgg | Tumorigenic |
| STAT3 | −1947 | −1930 | 0.968 | aggtTTCCtggaatgtggg | Tumorigenic |
| WT-1 | −1938 | −1919 | 0.967 | gaatgtgGGAGgagctttt | Tumorigenic |
| SMARCA-3 | −1852 | −1842 | 0.986 | tattACTTata | Lung cancer and tumorigenesis |
| GKLF | −1824 | −1806 | 0.965 | ttttttaAAAGgagagtat | Tumor suppressor (colorectal cancer) |
| MEIS-1 | −1752 | −1736 | 0.969 | actaaatcTGTCatctt | Myeloid Leukemia, viral integration |
| MIZ-1 | −1724 | −1710 | 1 | aaggcCCTCtg | Esophageal cancer |
| CDPCR3HD | −1634 | −1612 | 0.957 | aatacataGATCcatgttctgat | Cancer (?) |
| YY1 | −1627 | −1607 | 0.973 | atagatCCATgttctgattccat | Lung oncogene and tumorigenesis |
| AARE | −1613 | −1605 | 0.975 | aTTCCatca | Pulmonary obstruction and Lung cancer |
| CPHX | −1617 | −1605 | 0.977 | tcTGATtccatcatttgttagct | Development of Ovary |
| NKX2.5 | −1600 | −1582 | 0.984 | ttagcTGAGtgagatatag | Thyroid organogenesis and cancer |
| NKX2.5 | −1563 | −1546 | 0.951 | tttcaTAATtcataaaatg | Thyroid organogenesis and cancer |
| SOX6 | −1494 | −1472 | 0.986 | ataacACAAagcactttgaatag | Neurodevelopment and chondrogenesis |
| SMARCA-3 | −1473 | −1462 | 0.986 | agttACTTata | Chromatin remodeling and anti-depression |
| DLX-3 | −1473 | −1455 | 0,959 | agttacttaTAATtgtttt | Folliculogenesis |
| NOBOX | −1471 | −1452 | 0.978 | ttacttaTAATtgtttttt | Folliculogenesis |
| S8 | −1469 | −1450 | 0.995 | acttaTAATtgtttttttcct | Folliculogenesis |
| NFAT | −1422 | −1404 | 0.954 | gaataaGGAAaagcagtgg | T cell proliferatio and inflammation |
| GKLF | −1400 | −1382 | 0.97 | tttttttAAAGgcttgatt | Apoptotic |
| LHX6 | −1395 | −1373 | 0.975 | ttaaaggctTGATtattgcaatg | Neuro and lymphoid development |
| AREB6 | −1375 | −1363 | 0.978 | atgtCACCtgaac | Lung cancer and tumorigenesis |
| ZNF35 | −1382 | −1352 | 0.97 | tattgcaatgtcacctgaacctggAAGActt | Tumor suppressor |
| CEBPB | −1344 | −1329 | 0.952 | tgggtgaaGAAAtat | Macrophage function and inflammation |
| SMARCA3 | −1279 | −1269 | 0.985 | tgCCATttaaa | Chromatin remodeling and anti-depression |
| NKX3.1 | −1276 | −1258 | 0.955 | catttaaAGTGctcctctc | Prostate development and tumor suppressor |
| EVI1 | −1195 | −1179 | 1 | ttgacaAGATaaccact | Viral integration and myeloid leukemia |
| GATA1 | −1192 | −1180 | 0.957 | acaaGATAaccac | Erythroid development |
| CHR | −1173 | −1161 | 0.967 | ctctTTGAattct | RNA polymerase activation |
| RFX4 | −1126 | −1108 | 0.958 | gagttgacataGATActct | Spermatogenesis |
| SMARCA3 | −1097 | −1087 | 0.975 | taCCATgtgga | Chromatin remodeling and anti-depression |
| ARNT | −1078 | −1062 | 0.95 | tacttccaCGTGacctt | Toxin metabolism and hepatocellular carcinoma |
| MNT | −1077 | −1061 | 0.992 | acttcCACGtgaccttg | Transcriptional repressor of cell growth |
| DEC2 | −1076 | −1062 | 0.978 | cttccaCGTGacctt | Regulation of sleep and circadian rhythm |
| CARF | −1033 | −1022 | 0.97 | agaagGAGGca | Neuroprotection |
| ERG | −983 | −962 | 0.96 | gagaaataGGAAatgagcttt | Prostate tumor (fused with TMPRSS) |
| CRX | −853 | −837 | 0.963 | gcctgtaATCCtagcac | Photoreception and melatonin secretion |
| ESRRB | −821 | −799 | 0.978 | tgggcagatcacaAGGTcaggag | Neuroprotection, Stem cell pluripotency |
| SF1 | −814 | −799 | 0.996 | atcaCAAGgtcagga | Reproductive organ development |
| GATA1 | −803 | −791 | 0.961 | aggaGATAgagac | Blood cell maturation |
| GKLF | −739 | −721 | 0.988 | agctgggcGTGGtggtggg | Tumor Suppressor and cell reprogramming |
| AREB6 | −724 | −712 | 0.968 | tgggCACCtgtag | Lung cancer and tumorigenesis |
| ZNF750 | −500 | −486 | 1 | cgggaGGCTgaggca | Squamous epithelial cell development |
| IKZF3 | −521 | −509 | 0.995 | ggaagGGAAaatg | Lymphocyte development and differentiation |
| STAT3 | −495 | −477 | 0.98 | gagtttctgGGAAtatgat | Viral infection and tumor development |
| IK2 | −491 | −479 | 0.986 | ttctGGGAatatg | Embryonic development |
| SALL-1 | −472 | −460 | 0.977 | aaATAAaaataaa | Embryonic development of kidney and heart |
| GATA-4 | −458 | −446 | 0.965 | gtgaGATAaccta | Cardiac development |
| LMX1A | −453 | −431 | 0.969 | ataacctaTTAAtgaaattgtct | Insulin secretion |
| RU49 | −310 | −304 | 1 | aAGTAcc | Cerebellar development |
| GRHL | −309 | −297 | 0.973 | agtaccGGTTttg | Embryonic development |
| STAT3 | −335 | −316 | agctTTCTaggaaaatatt | Tumor formation and viral infection | |
| PDEF | −188 | −168 | 0.958 | cctctccaGGATgaactttat | Prostate-derived tumor suppressor |
| NRL | −169 | −145 | 1 | atattggctcAGCAgattgtttact | Rod photoreceptor development |
| TCF7L2 | −95 | −79 | 0.973 | ccaagttcAAAGgctga | HIV or HIV/HCV-coinfection and diabetes |
| GKLF or KLF4 | −94 | −76 | 0.98 | caagttcAAAGgctgataa | Tumor Suppressor and cell reprogramming |
| GATA | −84 | −72 | 0.995 | ggctGATAagaga | Growth, development and tumorigenesis |
Fig. 1ACE2 at the crossroad of lung cancer and COVID-19 infection. (A) Pathobiological roles of ACE2 during lung tumor progression (enclosed in red square) and COVID-19 (enclosed in blue square). (B) Promoter analysis of ACE2 for STAT3 binding. (For interpretation of the references to colour in this figure legend, the reader is referred to the web version of this article.)