Literature DB >> 33723254

SARS-CoV-2 hijacks folate and one-carbon metabolism for viral replication.

Yuchen Zhang1,2,3,4, Rui Guo1,2,3, Sharon H Kim1,5, Hardik Shah1,5, Shuting Zhang1, Jin Hua Liang1,2,3, Ying Fang6, Matteo Gentili1, Colin N O' Leary7, Steven J Elledge7, Deborah T Hung1, Vamsi K Mootha8,9, Benjamin E Gewurz10,11,12.   

Abstract

The recently identified Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) is the cause of the COVID-19 pandemic. How this novel beta-coronavirus virus, and coronaviruses more generally, alter cellular metabolism to support massive production of ~30 kB viral genomes and subgenomic viral RNAs remains largely unknown. To gain insights, transcriptional and metabolomic analyses are performed 8 hours after SARS-CoV-2 infection, an early timepoint where the viral lifecycle is completed but prior to overt effects on host cell growth or survival. Here, we show that SARS-CoV-2 remodels host folate and one-carbon metabolism at the post-transcriptional level to support de novo purine synthesis, bypassing viral shutoff of host translation. Intracellular glucose and folate are depleted in SARS-CoV-2-infected cells, and viral replication is exquisitely sensitive to inhibitors of folate and one-carbon metabolism, notably methotrexate. Host metabolism targeted therapy could add to the armamentarium against future coronavirus outbreaks.

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Year:  2021        PMID: 33723254      PMCID: PMC7960988          DOI: 10.1038/s41467-021-21903-z

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  43 in total

1.  Severe acute respiratory syndrome coronavirus nsp1 protein suppresses host gene expression by promoting host mRNA degradation.

Authors:  Wataru Kamitani; Krishna Narayanan; Cheng Huang; Kumari Lokugamage; Tetsuro Ikegami; Naoto Ito; Hideyuki Kubo; Shinji Makino
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-15       Impact factor: 11.205

Review 2.  Polyglutamation of methotrexate. Is methotrexate a prodrug?

Authors:  B A Chabner; C J Allegra; G A Curt; N J Clendeninn; J Baram; S Koizumi; J C Drake; J Jolivet
Journal:  J Clin Invest       Date:  1985-09       Impact factor: 14.808

3.  featureCounts: an efficient general purpose program for assigning sequence reads to genomic features.

Authors:  Yang Liao; Gordon K Smyth; Wei Shi
Journal:  Bioinformatics       Date:  2013-11-13       Impact factor: 6.937

4.  How many people has the coronavirus killed?

Authors:  Giuliana Viglione
Journal:  Nature       Date:  2020-09       Impact factor: 49.962

5.  Severe acute respiratory syndrome coronavirus replication is severely impaired by MG132 due to proteasome-independent inhibition of M-calpain.

Authors:  Martha Schneider; Kerstin Ackermann; Melissa Stuart; Claudia Wex; Ulrike Protzer; Hermann M Schätzl; Sabine Gilch
Journal:  J Virol       Date:  2012-07-11       Impact factor: 5.103

6.  Nonstructural protein 2 of porcine reproductive and respiratory syndrome virus inhibits the antiviral function of interferon-stimulated gene 15.

Authors:  Zhi Sun; Yanhua Li; Russell Ransburgh; Eric J Snijder; Ying Fang
Journal:  J Virol       Date:  2012-01-18       Impact factor: 5.103

7.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.

Authors:  Michael I Love; Wolfgang Huber; Simon Anders
Journal:  Genome Biol       Date:  2014       Impact factor: 13.583

Review 8.  Viral hijacking of cellular metabolism.

Authors:  Shivani K Thaker; James Ch'ng; Heather R Christofk
Journal:  BMC Biol       Date:  2019-07-18       Impact factor: 7.431

9.  Dietary methionine influences therapy in mouse cancer models and alters human metabolism.

Authors:  Sydney M Sanderson; Ziwei Dai; Xia Gao; Michael A Reid; Daniel E Cooper; Min Lu; John P Richie; Amy Ciccarella; Ana Calcagnotto; Peter G Mikhael; Samantha J Mentch; Juan Liu; Gene Ables; David G Kirsch; David S Hsu; Sailendra N Nichenametla; Jason W Locasale
Journal:  Nature       Date:  2019-07-31       Impact factor: 49.962

10.  Distinct mitochondrial defects trigger the integrated stress response depending on the metabolic state of the cell.

Authors:  Eran Mick; Denis V Titov; Owen S Skinner; Rohit Sharma; Alexis A Jourdain; Vamsi K Mootha
Journal:  Elife       Date:  2020-05-28       Impact factor: 8.140

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  29 in total

Review 1.  Flow-FISH as a Tool for Studying Bacteria, Fungi and Viruses.

Authors:  Julian J Freen-van Heeren
Journal:  BioTech (Basel)       Date:  2021-10-11

2.  Serine hydroxymethyltransferase as a potential target of antibacterial agents acting synergistically with one-carbon metabolism-related inhibitors.

Authors:  Yuko Makino; Chihiro Oe; Kazuya Iwama; Satoshi Suzuki; Akie Nishiyama; Kazuya Hasegawa; Haruka Okuda; Kazushige Hirata; Mariko Ueno; Kumi Kawaji; Mina Sasano; Emiko Usui; Toshiaki Hosaka; Yukako Yabuki; Mikako Shirouzu; Makoto Katsumi; Kazutaka Murayama; Hironori Hayashi; Eiichi N Kodama
Journal:  Commun Biol       Date:  2022-06-23

Review 3.  Interfering with SARS-CoV-2: are interferons friends or foes in COVID-19?

Authors:  Ivan Zanoni
Journal:  Curr Opin Virol       Date:  2021-08-17       Impact factor: 7.090

Review 4.  Antioxidant, anti-inflammatory and immunomodulatory roles of vitamins in COVID-19 therapy.

Authors:  Aurelia Magdalena Pisoschi; Aneta Pop; Florin Iordache; Loredana Stanca; Ovidiu Ionut Geicu; Liviu Bilteanu; Andreea Iren Serban
Journal:  Eur J Med Chem       Date:  2022-02-04       Impact factor: 6.514

Review 5.  Advanced glycation end products (AGEs) and its receptor, RAGE, modulate age-dependent COVID-19 morbidity and mortality. A review and hypothesis.

Authors:  Durai Sellegounder; Parisa Zafari; Misagh Rajabinejad; Mahdi Taghadosi; Pankaj Kapahi
Journal:  Int Immunopharmacol       Date:  2021-05-24       Impact factor: 5.714

Review 6.  The snapshot of metabolic health in evaluating micronutrient status, the risk of infection and clinical outcome of COVID-19.

Authors:  Dimitris Tsoukalas; Evangelia Sarandi; Spyridoula Georgaki
Journal:  Clin Nutr ESPEN       Date:  2021-06-26

7.  Genome-Scale Metabolic Model of Infection with SARS-CoV-2 Mutants Confirms Guanylate Kinase as Robust Potential Antiviral Target.

Authors:  Alina Renz; Lina Widerspick; Andreas Dräger
Journal:  Genes (Basel)       Date:  2021-05-24       Impact factor: 4.096

Review 8.  Impaired Folate-Mediated One-Carbon Metabolism in Type 2 Diabetes, Late-Onset Alzheimer's Disease and Long COVID.

Authors:  Melvin R Hayden; Suresh C Tyagi
Journal:  Medicina (Kaunas)       Date:  2021-12-23       Impact factor: 2.430

9.  Construction, Identification and Analysis of the Interaction Network of African Swine Fever Virus MGF360-9L with Host Proteins.

Authors:  Bo Yang; Dajun Zhang; Xijuan Shi; Chaochao Shen; Yu Hao; Ting Zhang; Jinke Yang; Xingguo Yuan; Xuehui Chen; Dengshuai Zhao; Huimei Cui; Dan Li; Zixiang Zhu; Hong Tian; Fan Yang; Haixue Zheng; Keshan Zhang; Xiangtao Liu
Journal:  Viruses       Date:  2021-09-10       Impact factor: 5.048

Review 10.  SARS-CoV-2 Subgenomic RNAs: Characterization, Utility, and Perspectives.

Authors:  Samuel Long
Journal:  Viruses       Date:  2021-09-24       Impact factor: 5.818

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