Literature DB >> 33720009

Genetic association and causal inference converge on hyperglycaemia as a modifiable factor to improve lung function.

William R Reay1,2, Sahar I El Shair1, Michael P Geaghan1,2, Carlos Riveros2,3, Elizabeth G Holliday2,3, Mark A McEvoy2,3, Stephen Hancock2,3, Roseanne Peel2,3, Rodney J Scott1,2, John R Attia2,3, Murray J Cairns1,2.   

Abstract

Measures of lung function are heritable, and thus, we sought to utilise genetics to propose drug-repurposing candidates that could improve respiratory outcomes. Lung function measures were found to be genetically correlated with seven druggable biochemical traits, with further evidence of a causal relationship between increased fasting glucose and diminished lung function. Moreover, we developed polygenic scores for lung function specifically within pathways with known drug targets and investigated their relationship with pulmonary phenotypes and gene expression in independent cohorts to prioritise individuals who may benefit from particular drug-repurposing opportunities. A transcriptome-wide association study (TWAS) of lung function was then performed which identified several drug-gene interactions with predicted lung function increasing modes of action. Drugs that regulate blood glucose were uncovered through both polygenic scoring and TWAS methodologies. In summary, we provided genetic justification for a number of novel drug-repurposing opportunities that could improve lung function.
© 2021, Reay et al.

Entities:  

Keywords:  GWAS; TWAS; causal inference; drug repurposing; genetics; genomics; human; lung function; polygenic scoring

Year:  2021        PMID: 33720009     DOI: 10.7554/eLife.63115

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  6 in total

Review 1.  Advancing the use of genome-wide association studies for drug repurposing.

Authors:  William R Reay; Murray J Cairns
Journal:  Nat Rev Genet       Date:  2021-07-23       Impact factor: 53.242

2.  The genetic architecture of pneumonia susceptibility implicates mucin biology and a relationship with psychiatric illness.

Authors:  William R Reay; Michael P Geaghan; Murray J Cairns
Journal:  Nat Commun       Date:  2022-06-29       Impact factor: 17.694

3.  Genetic estimates of correlation and causality between blood-based biomarkers and psychiatric disorders.

Authors:  William R Reay; Dylan J Kiltschewskij; Michael P Geaghan; Joshua R Atkins; Vaughan J Carr; Melissa J Green; Murray J Cairns
Journal:  Sci Adv       Date:  2022-04-06       Impact factor: 14.136

4.  Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder.

Authors:  William R Reay; Michael P Geaghan; Joshua R Atkins; Vaughan J Carr; Melissa J Green; Murray J Cairns
Journal:  Am J Hum Genet       Date:  2022-09-01       Impact factor: 11.043

5.  Variation in cardiovascular disease risk factors among older adults in the Hunter Community Study cohort: A comparison of diet quality versus polygenic risk score.

Authors:  William R Reay; Rebecca Haslam; Murray J Cairns; George Moschonis; Erin Clarke; John Attia; Clare Elizabeth Collins
Journal:  J Hum Nutr Diet       Date:  2022-05-30       Impact factor: 2.995

6.  Pairwise genetic meta-analyses between schizophrenia and substance dependence phenotypes reveals novel association signals with pharmacological significance.

Authors:  Laura A Greco; William R Reay; Christopher V Dayas; Murray J Cairns
Journal:  Transl Psychiatry       Date:  2022-09-23       Impact factor: 7.989

  6 in total

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