Literature DB >> 33718262

A Novel Molecular Method for Simultaneous Identification of Vibrio parahaemolyticus 57 K-Serogroups Using Probe Melting Curve Analysis.

Linying Lu1, Minxu Li2, Yinghui Li2, Min Jiang2, Yixiang Jiang2, Xiaolu Shi2, Le Zuo2, Lei Wang2, Shengzhe Bian3,4, Yaqun Qiu2, Rui Cai2, Yiqun Liao5, Qingge Li5, Liqiang Li4, Qinghua Hu1,2.   

Abstract

The serotyping of Vibrio parahaemolyticus, which is crucial to the surveillance and detection of outbreaks of vibriosis infection, has been widely used in many countries. In this study, we developed a molecular assay, named multiplex ligation reaction based on probe melting curve analysis (MLMA), for simultaneous identification of V. parahaemolyticus 57 K-serogroups. Based on the previous genomes of 418 strains including 39 K-serogroups and the 18 K-serogroups sequences from public databases, we obtained 57 K-serogroups specific gene sequences for designing primers and probes. The developed MLMA assay for identifying the V. parahaemolyticus 57 K-serogroups showed high reproducibility, with the intra- and inter-assay standard deviations and coefficients of variation of no more than 1°C and 1%, respectively. The limit of detection for all gene targets ranged from 0.1 to 1.0 ng/µl. We validated the MLMA assay with a double-blind test identifying 595 V. parahaemolyticus isolates using conventional serotyping methods for comparison. The results showed the kappa value between the MLMA assay and the traditional serological method was 0.936 and that there was a 96.97% consistency rate with conventional serotyping methods for all detected isolates. Additionally, five rare K-serogroups were identified using the MLMA assay, as well as 18 strains that could not be identified using the traditional serotyping method. Thus, the MLMA assay provides a rapid, robust, and promising tool for the molecular serotyping of V. parahaemolyticus K-serogroups and has the potential application to the detection of outbreaks and surveillance of V. parahaemolyticus infection.
Copyright © 2021 Lu, Li, Li, Jiang, Jiang, Shi, Zuo, Wang, Bian, Qiu, Cai, Liao, Li, Li and Hu.

Entities:  

Keywords:  K-serogroups; Vibrio parahaemolyticus; molecular identification; multiplex ligation reaction based on probe melting curve analysis; vibriosis surveillance

Mesh:

Year:  2021        PMID: 33718262      PMCID: PMC7953158          DOI: 10.3389/fcimb.2021.594808

Source DB:  PubMed          Journal:  Front Cell Infect Microbiol        ISSN: 2235-2988            Impact factor:   5.293


  27 in total

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10.  Simultaneous Identification of Clinically Common Vibrio parahaemolyticus Serotypes Using Probe Melting Curve Analysis.

Authors:  Minxu Li; Yixiang Jiang; Xiaolu Shi; Yinghui Li; Min Jiang; Yiman Lin; Yaqun Qiu; Le Zuo; Yinhua Deng; Zeren Lin; Yiqun Liao; Qingge Li; Qinghua Hu
Journal:  Front Cell Infect Microbiol       Date:  2019-11-14       Impact factor: 5.293

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