Literature DB >> 33717436

First phylogenetic analysis of Dryophthorinae (Coleoptera, Curculionidae) based on structural alignment of ribosomal DNA reveals Cenozoic diversification.

Maria Lourdes Chamorro1, Bruno A S de Medeiros2, Brian D Farrell3.   

Abstract

Dryophthorinae is an economically important, ecologically distinct, and ubiquitous monophyletic group of pantropical weevils with more than 1,200 species in 153 genera. This study provides the first comprehensive phylogeny of the group with the aim to provide insights into the process and timing of diversification of phytophagous insects, inform classification and facilitate predictions. The taxon sampling is the most extensive to date and includes representatives of all five dryophthorine tribes and all but one subtribe. The phylogeny is based on secondary structural alignment of 18S and 28S rRNA totaling 3,764 nucleotides analyzed under Bayesian and maximum likelihood inference. We used a fossil-calibrated relaxed clock model with two approaches, node-dating and fossilized birth-death models, to estimate divergence times for the subfamily. All tribes except the species-rich Rhynchophorini were found to be monophyletic, but higher support is required to ascertain the paraphyly of Rhynchophorini with more confidence. Nephius is closely related to Dryophthorini and Stromboscerini, and there is strong evidence for paraphyly of Sphenophorina. We find a large gap between the divergence of Dryophthorinae from their sister group Platypodinae in the Jurassic-Cretaceous boundary and the diversification of extant species in the Cenozoic, highlighting the role of coevolution with angiosperms in this group.
© 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd This article has been contributed to by US Government employees and their work is in the public domain in the USA.

Entities:  

Keywords:  angiosperms; coevolution; fossilized birth‐death model; node dating; palm weevils; red palm weevil; structural alignment

Year:  2021        PMID: 33717436      PMCID: PMC7920784          DOI: 10.1002/ece3.7131

Source DB:  PubMed          Journal:  Ecol Evol        ISSN: 2045-7758            Impact factor:   2.912


  35 in total

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Journal:  J Theor Biol       Date:  2010-09-18       Impact factor: 2.691

2.  DendroPy: a Python library for phylogenetic computing.

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Journal:  Bioinformatics       Date:  2010-04-25       Impact factor: 6.937

3.  PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses.

Authors:  Robert Lanfear; Paul B Frandsen; April M Wright; Tereza Senfeld; Brett Calcott
Journal:  Mol Biol Evol       Date:  2017-03-01       Impact factor: 16.240

4.  Dryophthorinae weevils (Coleoptera: Curculionidae) of the forest floor in  Southeast Asia: illustrated overview of nominal Stromboscerini genera.

Authors:  Vasily V Grebennikov
Journal:  Zootaxa       Date:  2018-05-07       Impact factor: 1.091

5.  West meets East: How do rainforest beetles become circum-Pacific? Evolutionary origin of Callipogon relictus and allied species (Cerambycidae: Prioninae) in the New and Old Worlds.

Authors:  Sangil Kim; Bruno A S de Medeiros; Bong-Kyu Byun; Seunghwan Lee; Jung-Hoon Kang; Bongwoo Lee; Brian D Farrell
Journal:  Mol Phylogenet Evol       Date:  2018-03-07       Impact factor: 4.286

6.  Temporal lags and overlap in the diversification of weevils and flowering plants.

Authors:  Duane D McKenna; Andrea S Sequeira; Adriana E Marvaldi; Brian D Farrell
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-13       Impact factor: 11.205

7.  Total-Evidence Dating under the Fossilized Birth-Death Process.

Authors:  Chi Zhang; Tanja Stadler; Seraina Klopfstein; Tracy A Heath; Fredrik Ronquist
Journal:  Syst Biol       Date:  2015-10-22       Impact factor: 15.683

8.  The delayed and geographically heterogeneous diversification of flowering plant families.

Authors:  Santiago Ramírez-Barahona; Hervé Sauquet; Susana Magallón
Journal:  Nat Ecol Evol       Date:  2020-07-06       Impact factor: 15.460

9.  The lesser of two weevils: molecular-genetics of pest palm weevil populations confirm Rhynchophorus vulneratus (Panzer 1798) as a valid species distinct from R. ferrugineus (Olivier 1790), and reveal the global extent of both.

Authors:  Paul F Rugman-Jones; Christina D Hoddle; Mark S Hoddle; Richard Stouthamer
Journal:  PLoS One       Date:  2013-10-15       Impact factor: 3.240

10.  IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era.

Authors:  Bui Quang Minh; Heiko A Schmidt; Olga Chernomor; Dominik Schrempf; Michael D Woodhams; Arndt von Haeseler; Robert Lanfear
Journal:  Mol Biol Evol       Date:  2020-05-01       Impact factor: 16.240

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  2 in total

1.  The transposable element-rich genome of the cereal pest Sitophilus oryzae.

Authors:  Nicolas Parisot; Carlos Vargas-Chávez; Clément Goubert; Patrice Baa-Puyoulet; Séverine Balmand; Louis Beranger; Caroline Blanc; Aymeric Bonnamour; Matthieu Boulesteix; Nelly Burlet; Federica Calevro; Patrick Callaerts; Théo Chancy; Hubert Charles; Stefano Colella; André Da Silva Barbosa; Elisa Dell'Aglio; Alex Di Genova; Gérard Febvay; Toni Gabaldón; Mariana Galvão Ferrarini; Alexandra Gerber; Benjamin Gillet; Robert Hubley; Sandrine Hughes; Emmanuelle Jacquin-Joly; Justin Maire; Marina Marcet-Houben; Florent Masson; Camille Meslin; Nicolas Montagné; Andrés Moya; Ana Tereza Ribeiro de Vasconcelos; Gautier Richard; Jeb Rosen; Marie-France Sagot; Arian F A Smit; Jessica M Storer; Carole Vincent-Monegat; Agnès Vallier; Aurélien Vigneron; Anna Zaidman-Rémy; Waël Zamoum; Cristina Vieira; Rita Rebollo; Amparo Latorre; Abdelaziz Heddi
Journal:  BMC Biol       Date:  2021-11-09       Impact factor: 7.431

2.  Microsatellite Variation in the Most Devastating Beetle Pests (Coleoptera: Curculionidae) of Agricultural and Forest Crops.

Authors:  Manee M Manee; Badr M Al-Shomrani; Musaad A Altammami; Hamadttu A F El-Shafie; Atheer A Alsayah; Fahad M Alhoshani; Fahad H Alqahtani
Journal:  Int J Mol Sci       Date:  2022-08-30       Impact factor: 6.208

  2 in total

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