Literature DB >> 33717433

Demography_Lab, an educational application to evaluate population growth: Unstructured and matrix models.

Julio Arrontes1.   

Abstract

Training in Population Ecology asks for scalable applications capable of embarking students on a trip from basic concepts to the projection of populations under the various effects of density dependence and stochasticity. Demography_Lab is an educational tool for teaching Population Ecology aspiring to cover such a wide range of objectives. The application uses stochastic models to evaluate the future of populations. Demography_Lab may accommodate a wide range of life cycles and can construct models for populations with and without an age or stage structure. Difference equations are used for unstructured populations and matrix models for structured populations. Both types of models operate in discrete time. Models can be very simple, constructed with very limited demographic information or parameter-rich, with a complex density-dependence structure and detailed effects of the different sources of stochasticity. Demography_Lab allows for deterministic projections, asymptotic analysis, the extraction of confidence intervals for demographic parameters, and stochastic projections. Stochastic population growth is evaluated using up to three sources of stochasticity: environmental and demographic stochasticity and sampling error in obtaining the projection matrix. The user has full control on the effect of stochasticity on vital rates. The effect of the three sources of stochasticity may be evaluated independently for each vital rate. The user has also full control on density dependence. It may be included as a ceiling population size controlling the number of individuals in the population or it may be evaluated independently for each vital rate. Sensitivity analysis can be done for the asymptotic population growth rate or for the probability of extinction. Elasticity of the probability of extinction may be evaluated in response to changes in vital rates, and in response to changes in the intensity of density dependence and environmental stochasticity.
© 2021 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.

Entities:  

Keywords:  demographic stochasticity; environmental stochasticity; matrix model; population model; sampling error; sensitivity analysis; stochastic model

Year:  2021        PMID: 33717433      PMCID: PMC7920771          DOI: 10.1002/ece3.7170

Source DB:  PubMed          Journal:  Ecol Evol        ISSN: 2045-7758            Impact factor:   2.912


  14 in total

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Journal:  Am Nat       Date:  2005-04-19       Impact factor: 3.926

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Journal:  Trends Ecol Evol       Date:  2013-07-01       Impact factor: 17.712

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Review 6.  The fallacy of the average: on the ubiquity, utility and continuing novelty of Jensen's inequality.

Authors:  Mark Denny
Journal:  J Exp Biol       Date:  2017-01-15       Impact factor: 3.312

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Authors:  Jakub Bijak
Journal:  Popul Stud (Camb)       Date:  2018-03-29

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Authors:  Ben Collen; Louise McRae; Stefanie Deinet; Adriana De Palma; Tharsila Carranza; Natalie Cooper; Jonathan Loh; Jonathan E M Baillie
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-09-12       Impact factor: 6.237

9.  Increased spatial and temporal autocorrelation of temperature under climate change.

Authors:  Grace J Di Cecco; Tarik C Gouhier
Journal:  Sci Rep       Date:  2018-10-04       Impact factor: 4.379

10.  Modeling Invasion Dynamics with Spatial Random-Fitness Due to Micro-Environment.

Authors:  V S K Manem; K Kaveh; M Kohandel; S Sivaloganathan
Journal:  PLoS One       Date:  2015-10-28       Impact factor: 3.240

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