Literature DB >> 3371663

Sequence organization and putative regulatory elements in the 5S rRNA genes of two higher plants (Vigna radiata and Matthiola incana).

V Hemleben1, D Werts.   

Abstract

The tandemly arranged and clustered highly repeated 5S rRNA genes are investigated for two plants belonging to different higher plant families: Matthiola incana (Brassicaceae, Dilleniidae, Rosidae; 3600 5S rRNA genes/n) shows a homogeneous repeat size of 510 bp, whereas Vigna radiata (mung bean, former Phaseolus aureus, Fabaceae, Rosidae; approx. 4300 5S rRNA genes) has a repeat size of 215 bp. The mung-bean 5S rRNA coding region starts 5' with AGG and ends with CCT; Matthiola starts with GGG and ends with CCC. Striking is the strict occurrence of a 'TATA' box starting at nucleotide-28 similar to Neurospora crassa 5S rRNA genes. The 3' end is followed by CTTTT or GTTT stretches present in different numbers in the non-transcribed spacer suggesting a function in termination.

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Year:  1988        PMID: 3371663     DOI: 10.1016/0378-1119(88)90591-4

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  22 in total

1.  Analysis of 5S rDNA arrays in Arabidopsis thaliana: physical mapping and chromosome-specific polymorphisms.

Authors:  C Cloix; S Tutois; O Mathieu; C Cuvillier; M C Espagnol; G Picard; S Tourmente
Journal:  Genome Res       Date:  2000-05       Impact factor: 9.043

2.  Nucleotide sequence of the 5S rRNA gene from Glycine soja.

Authors:  A Kolchinsky; P M Gresshoff
Journal:  Plant Mol Biol       Date:  1992-09       Impact factor: 4.076

3.  Low abundant spacer 5S rRNA transcripts are frequently polyadenylated in Nicotiana.

Authors:  Jaroslav Fulnecek; Ales Kovarik
Journal:  Mol Genet Genomics       Date:  2007-08-02       Impact factor: 3.291

4.  Sequence of the 5S rRNA gene from Sinapis alba.

Authors:  I Capesius
Journal:  Plant Mol Biol       Date:  1991-07       Impact factor: 4.076

5.  A specific oligonucleotide of the 5S rDNA spacer and species-specific elements identify symmetric somatic hybrids between Solanum tuberosum and S. pinnatisectum.

Authors:  C Zanke; N Borisjuk; B Ruoss; L Schilde-Rentschler; H Ninnemann; V Hemleben
Journal:  Theor Appl Genet       Date:  1995-04       Impact factor: 5.699

6.  Polymorphism and concerted evolution in a tandemly repeated gene family: 5S ribosomal DNA in diploid and allopolyploid cottons.

Authors:  R C Cronn; X Zhao; A H Paterson; J F Wendel
Journal:  J Mol Evol       Date:  1996-06       Impact factor: 2.395

7.  Sequence and putative regulatory elements in a 5S rRNA gene from a eukaryotic thermophile, Thermomyces lanuginosus.

Authors:  L A Sutherland; W M Wong; R N Nazar
Journal:  Nucleic Acids Res       Date:  1989-12-25       Impact factor: 16.971

8.  The nucleotide sequences of nuclear 5S rRNA genes and spacer regions of Petunia hybrida.

Authors:  M Frasch; W Wenzel; D Hess
Journal:  Nucleic Acids Res       Date:  1989-04-11       Impact factor: 16.971

9.  5S rRNA genes in Pisum: sequence, long range and chromosomal organization.

Authors:  T H Ellis; D Lee; C M Thomas; P R Simpson; W G Cleary; M A Newman; K W Burcham
Journal:  Mol Gen Genet       Date:  1988-10

10.  Development of genetic markers in celery based on restriction fragment length polymorphisms.

Authors:  G M Huestis; J M McGrath; C F Quiros
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

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