Literature DB >> 33716023

Application of DNP-enhanced solid-state NMR to studies of amyloid-β peptide interaction with lipid membranes.

Thomas Deo1, Qinghui Cheng2, Subhadip Paul1, Wei Qiang2, Alexey Potapov3.   

Abstract

The cellular membrane disruption induced by the aggregation of Aβ peptide has been proposed as a plausible cause of neuronal cell death during Alzheimer's disease. The molecular-level details of the Aβ interaction with cellular membranes were previously probed using solid state NMR (ssNMR), however, due to the limited sensitivity of the latter, studies were limited to samples with high Aβ-to-lipid ratio. The dynamic nuclear polarization (DNP) is a technique for increasing the sensitivity of NMR. In this work we demonstrate the feasibility of DNP-enhanced ssNMR studies of Aβ40 peptide interacting with various model liposomes: (1) a mixture of zwitterionic 1-palmitoyl-2-oleoyl-glycero-3-phosphocholine (POPC) and negatively charged 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(1'-rac-glycerol) (POPG); (2) a mixture of POPC, POPG, cholesterol, sphingomyelin and ganglioside GM1; (3) the synaptic plasma membrane vesicles (SPMVs) extracted from rat brain tissues. In addition, DNP-ssNMR was applied to capturing changes in Aβ40 conformation taking place upon the peptide insertion into POPG liposomes. The signal enhancements under conditions of DNP allow carrying out informative 2D ssNMR experiments with about 0.25 mg of Aβ40 peptides (i.e. reaching Aβ40-to-lipid ratio of 1:200). In the studied liposome models, the 13C NMR chemical shifts at many 13C-labelled sites of Aβ40 are characteristic of β-sheets. In addition, in POPG liposomes the peptide forms hydrophobic contacts F19-L34 and F19-I32. Both the chemical shifts and hydrophobic contacts of Aβ40 in POPG remain the same before and after 8 h of incubation. This suggests that conformation at the 13C-labelled sites of the peptide is similar before and after the insertion process. Overall, our results demonstrate that DNP helps to overcome the sensitivity limitation of ssNMR, and thereby expand the applicability of ssNMR for charactering the Aβ peptide interacting with lipids.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Beta-amyloid peptides; Dynamic nuclear polarization; Membranes; Solid-state NMR spectroscopy

Mesh:

Substances:

Year:  2021        PMID: 33716023      PMCID: PMC8022895          DOI: 10.1016/j.chemphyslip.2021.105071

Source DB:  PubMed          Journal:  Chem Phys Lipids        ISSN: 0009-3084            Impact factor:   3.329


  81 in total

1.  Dynamic nuclear polarization of deuterated proteins.

Authors:  Ümit Akbey; W Trent Franks; Arne Linden; Sascha Lange; Robert G Griffin; Barth-Jan van Rossum; Hartmut Oschkinat
Journal:  Angew Chem Int Ed Engl       Date:  2010-10-11       Impact factor: 15.336

2.  A new structural model of Aβ40 fibrils.

Authors:  Ivano Bertini; Leonardo Gonnelli; Claudio Luchinat; Jiafei Mao; Antonella Nesi
Journal:  J Am Chem Soc       Date:  2011-09-21       Impact factor: 15.419

3.  Dynamic Nuclear Polarization enhanced NMR at 187 GHz/284 MHz using an Extended Interaction Klystron amplifier.

Authors:  Thomas F Kemp; Hugh R W Dannatt; Nathan S Barrow; Anthony Watts; Steven P Brown; Mark E Newton; Ray Dupree
Journal:  J Magn Reson       Date:  2016-02-02       Impact factor: 2.229

Review 4.  Dynamic nuclear polarization for sensitivity enhancement in modern solid-state NMR.

Authors:  Aany Sofia Lilly Thankamony; Johannes J Wittmann; Monu Kaushik; Björn Corzilius
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2017-07-23       Impact factor: 9.795

5.  Low-temperature dynamic nuclear polarization at 9.4 T with a 30 mW microwave source.

Authors:  Kent R Thurber; Wai-Ming Yau; Robert Tycko
Journal:  J Magn Reson       Date:  2010-03-23       Impact factor: 2.229

6.  Solid state nuclear magnetic resonance with magic-angle spinning and dynamic nuclear polarization below 25 K.

Authors:  Kent R Thurber; Alexey Potapov; Wai-Ming Yau; Robert Tycko
Journal:  J Magn Reson       Date:  2012-11-21       Impact factor: 2.229

Review 7.  Amyloid beta-protein interactions with membranes and cholesterol: causes or casualties of Alzheimer's disease.

Authors:  W Gibson Wood; Gunter P Eckert; Urule Igbavboa; Walter E Müller
Journal:  Biochim Biophys Acta       Date:  2003-03-10

8.  Influence of deuteration in the glassing matrix on 13C dynamic nuclear polarization.

Authors:  Lloyd Lumata; Matthew E Merritt; Zoltan Kovacs
Journal:  Phys Chem Chem Phys       Date:  2013-05-21       Impact factor: 3.676

9.  Effect of water/glycerol polymorphism on dynamic nuclear polarization.

Authors:  Alisa Leavesley; Christopher B Wilson; Mark Sherwin; Songi Han
Journal:  Phys Chem Chem Phys       Date:  2018-04-18       Impact factor: 3.676

10.  Fibrillar and Nonfibrillar Amyloid Beta Structures Drive Two Modes of Membrane-Mediated Toxicity.

Authors:  Crystal M Vander Zanden; Lois Wampler; Isabella Bowers; Erik B Watkins; Jaroslaw Majewski; Eva Y Chi
Journal:  Langmuir       Date:  2019-09-26       Impact factor: 3.882

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  1 in total

1.  Early stage β-amyloid-membrane interactions modulate lipid dynamics and influence structural interfaces and fibrillation.

Authors:  June M Kenyaga; Qinghui Cheng; Wei Qiang
Journal:  J Biol Chem       Date:  2022-09-14       Impact factor: 5.486

  1 in total

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