Literature DB >> 33714756

C-terminal troponin-I residues trap tropomyosin in the muscle thin filament blocked-state.

William Lehman1, Elumalai Pavadai2, Michael J Rynkiewicz3.   

Abstract

Tropomyosin and troponin regulate muscle contraction by participating in a macromolecular scale steric-mechanism to control myosin-crossbridge - actin interactions and consequently contraction. At low-Ca2+, the C-terminal 30% of troponin subunit-I (TnI) is proposed to trap tropomyosin in a position on thin filaments that sterically interferes with myosin-binding, thus causing muscle relaxation. In contrast, at high-Ca2+, inhibition is released after the C-terminal domains dissociate from F-actin-tropomyosin as its component switch-peptide domain binds to the N-lobe of troponin-C (TnC). Recent, paradigm-shifting, cryo-EM reconstructions by the Namba group have revealed density attributed to TnI along cardiac muscle thin filaments at both low- and high-Ca2+ concentration. Modeling the reconstructions showed expected high-Ca2+ hydrophobic interactions of the TnI switch-peptide and TnC. However, under low-Ca2+ conditions, sparse interactions of TnI and tropomyosin, and in particular juxtaposition of non-polar switch-peptide residues and charged tropomyosin amino acids in the published model seem difficult to reconcile with an expected steric-blocking conformation. This anomaly is likely due to inaccurate fitting of tropomyosin into the cryo-EM volume. In the current study, the low-Ca2+ cryo-EM volume was fitted with a more accurate tropomyosin model and representation of cardiac TnI. Our results show that at low-Ca2+ a cluster of hydrophobic residues at the TnI switch-peptide and adjacent H4 helix (Ala149, Ala151, Met 154, Leu159, Gly160, Ala161, Ala163, Leu167, Leu169, Ala171, Leu173) draw-in tropomyosin surface residues (Ile143, Ile146, Ala151, Ile154), presumably attracting the entire tropomyosin cable to its myosin-blocking position on actin. The modeling confirms that neighboring TnI "inhibitory domain" residues (Arg145, Arg148) bind to thin filaments at actin residue Asp25, as previously suggested. ClusPro docking of TnI residues 137-184 to actin-tropomyosin, including the TnI inhibitory-domain, switch-peptide and Helix H4, verified the modeled configuration. Our residue-to-residue contact-mapping of the TnI-tropomyosin association lends itself to experimental validation and functional localization of disease-bearing mutations.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Actin; Cryo-electron microscopy; Molecular modeling; Protein-protein docking; Tropomyosin; Troponin

Mesh:

Substances:

Year:  2021        PMID: 33714756      PMCID: PMC8026701          DOI: 10.1016/j.bbrc.2021.03.010

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  34 in total

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3.  The functional significance of the last 5 residues of the C-terminus of cardiac troponin I.

Authors:  Jennifer E Gilda; Qian Xu; Margaret E Martinez; Susan T Nguyen; P Bryant Chase; Aldrin V Gomes
Journal:  Arch Biochem Biophys       Date:  2016-02-23       Impact factor: 4.013

4.  The ClusPro web server for protein-protein docking.

Authors:  Dima Kozakov; David R Hall; Bing Xia; Kathryn A Porter; Dzmitry Padhorny; Christine Yueh; Dmitri Beglov; Sandor Vajda
Journal:  Nat Protoc       Date:  2017-01-12       Impact factor: 13.491

5.  Cryo-EM structure of a human cytoplasmic actomyosin complex at near-atomic resolution.

Authors:  Julian von der Ecken; Sarah M Heissler; Salma Pathan-Chhatbar; Dietmar J Manstein; Stefan Raunser
Journal:  Nature       Date:  2016-06-20       Impact factor: 49.962

6.  Reconstitution of troponin activity from three protein components.

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7.  Achieving reliability and high accuracy in automated protein docking: ClusPro, PIPER, SDU, and stability analysis in CAPRI rounds 13-19.

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8.  Cryo-EM structures of cardiac thin filaments reveal the 3D architecture of troponin.

Authors:  Toshiyuki Oda; Haruaki Yanagisawa; Takeyuki Wakabayashi
Journal:  J Struct Biol       Date:  2020-01-16       Impact factor: 2.867

Review 9.  Order-Disorder Transitions in the Cardiac Troponin Complex.

Authors:  Lauren Ann Metskas; Elizabeth Rhoades
Journal:  J Mol Biol       Date:  2016-07-06       Impact factor: 5.469

10.  Cryo-EM and Molecular Docking Shows Myosin Loop 4 Contacts Actin and Tropomyosin on Thin Filaments.

Authors:  Matthew H Doran; Elumalai Pavadai; Michael J Rynkiewicz; Jonathan Walklate; Esther Bullitt; Jeffrey R Moore; Michael Regnier; Michael A Geeves; William Lehman
Journal:  Biophys J       Date:  2020-07-16       Impact factor: 4.033

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  4 in total

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2.  Free-Energy Surfaces of Two Cardiac Thin Filament Conformational Changes during Muscle Contraction.

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Journal:  J Phys Chem B       Date:  2022-05-18       Impact factor: 3.466

Review 3.  Modeling Human Cardiac Thin Filament Structures.

Authors:  Michael J Rynkiewicz; Elumalai Pavadai; William Lehman
Journal:  Front Physiol       Date:  2022-06-22       Impact factor: 4.755

4.  Computational and biophysical determination of pathogenicity of variants of unknown significance in cardiac thin filament.

Authors:  Allison B Mason; Melissa L Lynn; Anthony P Baldo; Andrea E Deranek; Jil C Tardiff; Steven D Schwartz
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  4 in total

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