Literature DB >> 33714200

A novel panel based on immune infiltration and tumor mutational burden for prognostic prediction in hepatocellular carcinoma.

Chan Xie1, Hewei Wu1, Tao Pan2, Xingrong Zheng1, Xiaoan Yang1, Genglin Zhang1, Yunwen Lian1, Jiaxin Lin1, Liang Peng1.   

Abstract

Tumor mutation burden (TMB) has been associated with prognosis in various malignancies, but it has yet to be elucidated in hepatocellular carcinoma (HCC). We aimed to investigate the prognostic effects of TMB and its relationship with immune infiltration through multiple databases and whole-exome sequencing, so as to establish a panel model capable of predicting prognosis. The results demonstrated that the prognosis of high TMB group was worse than that of low TMB group, with a cutoff TMB value of 4.9. Enrichment analysis demonstrated that differentially expressed genes were mainly related to T cell activation, cell membrane localization and matrix composition. Tumor immune infiltration analysis revealed the infiltrations of Th2, Th17, and Tgd were up-regulated in high TMB group, while those of Tr1, MAIT, and DC were up-regulated in low TMB group. TMB-Infiltration model fit well with the actual survival observation, with a C-index 0.785 (0.700-0.870), which verified in ICGC-LIRI-JP was 0.650 (0.553-0.747). Additionally, these screened immune genes performed well in predicting tumor vascular invasion with a C-index of 0.847 (0.778-0.916). Overall, these results indicated that patients with high mutation frequency of immune-related genes and high TMB were prone to have worse prognosis and relapse after radical treatment.

Entities:  

Keywords:  hepatocellular carcinoma; immune infiltration; neoplasm recurrence; tumor mutation burden; vascular invasion

Year:  2021        PMID: 33714200     DOI: 10.18632/aging.202670

Source DB:  PubMed          Journal:  Aging (Albany NY)        ISSN: 1945-4589            Impact factor:   5.682


  2 in total

1.  Pyroptosis-Related Risk Signature Exhibits Distinct Prognostic, Immune, and Therapeutic Landscapes in Hepatocellular Carcinoma.

Authors:  Yidi Zhao; Qingya Song; Fangshi Xu; Yang Zhou; Xiaoli Zuo; Zhengliang Zhang
Journal:  Front Genet       Date:  2022-03-09       Impact factor: 4.599

2.  Early changes in peripheral blood cytokine levels after the treatment of metastatic hepatic carcinoma with CalliSpheres microspheres drug-eluting beads transcatheter arterial chemoembolization.

Authors:  Ying Liu; Song Liu; Guang Sheng Zhao; Xiang Li; Fei Gao; Zhi Zhong Ren; Jie Bian; Jian Lin Wu; Yue Wei Zhang
Journal:  Front Oncol       Date:  2022-07-29       Impact factor: 5.738

  2 in total

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