Literature DB >> 33714082

CircRNA profiling reveals circ880 functions as miR-375-3p sponge in medaka gonads.

Yu Zhang1, Ying Zhong1, Shaoyu Guo1, Yefei Zhu1, Jing Guo1, Yuanshuai Fu2, Mingyou Li3.   

Abstract

Circular RNAs (circRNAs) have been regarded as regulators in the biological processes of various species. However, there is no report about circRNAs in the gonads of model fish medaka (Oryzias latipes). In this study, 1157 and 1570 circRNAs were obtained in the ovary and testis by RNA-sequencing. The characteristics of circRNAs were explored in sequence length, exon composition, and chromosome position. 24 circRNAs were significantly up or down-regulated in the testis compared to the ovary, 9 of which were verified by qRT-PCR. Interestingly, circ452 was highly expressed in the testis while circ880 expression exhibited sexual dimorphism. In situ hybridization (ISH) revealed that circ452 and circ880 were expressed in meiotic germ cells, and circ880 was also abundant in spermatogonia. In addition, dual-luciferase reporter assay manifested that circ880 and Oldnd can combine with miR-375-3p. Overall, these results provide emerging circRNA libraries and open new avenues for future investigation of circRNAs in medaka.
Copyright © 2021. Published by Elsevier Inc.

Entities:  

Keywords:  Circular RNAs; Gonad; Medaka; RNA-sequencing; miRNA sponge

Year:  2021        PMID: 33714082     DOI: 10.1016/j.cbd.2021.100797

Source DB:  PubMed          Journal:  Comp Biochem Physiol Part D Genomics Proteomics        ISSN: 1744-117X            Impact factor:   2.674


  2 in total

1.  Circular RNA expression profiles and CircSnd1-miR-135b/c-foxl2 axis analysis in gonadal differentiation of protogynous hermaphroditic ricefield eel Monopterus albus.

Authors:  Zhi He; Zhijun Ma; Deying Yang; Qiqi Chen; Zhide He; Jiaxiang Hu; Faqiang Deng; Qian Zhang; Jiayang He; Lijuan Ye; Hongjun Chen; Liang He; Xiaoli Huang; Wei Luo; Shiyong Yang; Xiaobin Gu; Mingwang Zhang; Taiming Yan
Journal:  BMC Genomics       Date:  2022-08-03       Impact factor: 4.547

2.  Establishment of a Coilia nasus Gonadal Somatic Cell Line Capable of Sperm Induction In Vitro.

Authors:  Yuting Kan; Ying Zhong; Muhammad Jawad; Xiao Chen; Dong Liu; Mingchun Ren; Gangchun Xu; Lang Gui; Mingyou Li
Journal:  Biology (Basel)       Date:  2022-07-13
  2 in total

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