| Literature DB >> 33710356 |
Roghayeh Sheervalilou1, Milad Shirvaliloo2, Saman Sargazi3, Sakine Shirvalilou4, Omolbanin Shahraki1, Younes Pilehvar-Soltanahmadi5, Alireza Sarhadi1, Ziba Nazarlou6, Habib Ghaznavi7, Samideh Khoei8.
Abstract
A most discussed topic of the new decade, COVID-19 is an infectious disease caused by the recently discovered SARS-CoV-2. With an exceedingly high transmission rate, COVID-19 has affected almost all the countries in the world. Absent any vaccine or specific treatment, the humanity is left with nothing but the legacy method of quarantine. However, quarantine can only be effective when combined with early diagnosis of suspected cases. With their high sensitivity and unmatched specificity, biosensors have become an area of interest for development of novel diagnostic methods. Compared to the more traditional diagnostics, nanobiotechnology introduces biosensors as different diagnostics with greater versatility in application. Today, a growing number of analytes are being accurately identified by these nanoscopic sensing machines. Several reports of validated application with real samples further strengthen this idea. As of recent, there has been a rise in the number of studies on portable biosensors. Despite the slow progression, certain devices with embedded biosensors have managed to be of diagnostic value in several countries. The perceptible increase in development of mobile platforms has revolutionized the healthcare delivery system in the new millennium. The present article reviews the most recent advancements in development of diagnostic nanobiosensors and their application in the clinical fields. KEY POINTS: • There is no specific treatment for highly transmissible SARS-CoV-2. • Early diagnosis is critical for control of pandemic. • Highly sensitive/specific nanobiosensors are emerging assets against COVID-19.Entities:
Keywords: 2019-nCoV; Biosensor; COVID-19; Early diagnosis; Nanobiotechnology; Pandemic; SARS-CoV-2
Mesh:
Year: 2021 PMID: 33710356 PMCID: PMC7952259 DOI: 10.1007/s00253-021-11197-y
Source DB: PubMed Journal: Appl Microbiol Biotechnol ISSN: 0175-7598 Impact factor: 4.813
Fig. 1The COVID-19 diagnosis by biosensors. (Abbreviations: SARS-CoV-2, severe respiratory syndrome coronavirus 2)
Recent studies on virus monitoring by biosensors
| Sensor | Nanomaterial | Probe | Virus | Sample | LOD, sensitivity/specificity | Efficiency | Ref |
|---|---|---|---|---|---|---|---|
| Optical resonance | PS, silica microsphere | - | Flu A | PBS filled sample cell | High sensitivity | Label-free, real-time optical detection | Vollmer et al. ( |
| DNA sensor | MWCNTs | DNA probe | Flu A | The cell filled with 2 mL of buffer solution | 0.5 nM | Direct and label-free detection, response time of DNA sensor: 4 min, highly sensitive, low-cost, potential application in controlling disease | Tam et al. ( |
| SPR aptasensor | Streptavidin-biotin, Au surface | DNA-aptamer | AIV H5N1 | Swab samples | R2 = 0.99, AIV range: 0.128–1.28 HAU, negligible signal (<4% of H5N1): from six non-target AIV subtypes | HAU detection: in 1.5 h, rapid and specific detection | Bai et al. ( |
| piezoelectric QCM and SPR sensors | Au, quartz crystal | 4-APBA, SA | Flu A | Virus | LOD: QCM: 4.7×10−2 μM, (0.26 μg ml−1) SPR: 1.28×10−1 μM, (0.72 μg ml−1) in the 95% CI | Rapid, sensitive, simpler, and less expensive | Diltemiz et al. ( |
| LSPR | AuNPs | dsDNA, upE, and ORF 1a | MERS-CoV, TMV | Virus | 1 pmol/μL of 30 bp MERS-CoV | Label-free, rapid and accurate diagnostic, on-site detection especially in resource-limited settings | Kim et al. ( |
Abbreviations: MWCNTs carbon multi-walled nanotubes, Flu A influenza A virus, NPs nanoparticles, PBS phosphate-buffered saline, PS polystyrene particles, AIV H1N1 avian influenza virus H5N1, SPR surface plasmon resonance, R2 linearly related, HAU HA unit, QCM quartz crystal microbalance, HA hemagglutinin, Ab antibody, CI confidence interval, 4-APBA 4-aminophenyl boronic acid, SA sialic acid, Au gold, AuNPs gold nanoparticles, dsDNA double-stranded DNA, upE E protein gene, ORF open reading frames, MERS-CoV Middle East respiratory syndrome, TMV tobacco mosaic virus
Fig. 2Biosensors in SARS-CoV-2 detection. (Abbreviations: SARS-CoV-2, severe respiratory syndrome coronavirus 2; FET, field-effect transistor; Gr, graphene; S pro, spike protein; CSAb, SARS-COV spike S1 subunit protein antibody; ACE2R, angiotensin-converting enzyme 2 receptor; PBASE, 1-pyrenebutanoic acid succinimidyl ester; RT-LAMP-NBS, reverse transcription loop–mediated isothermal amplification coupled with nanoparticle-based biosensor assay; TL 1, test line 1; TL 2, test line 2; CL, control line; FITC, fluorescein; Dig, digoxigenin; Biotin-BSA, biotinylated bovine serum albumin; Dig-biotin-np-LAMP amp, Dig-biotin–labeled np-LAMP amplicons; FITC-biotin-F1ab-LAMP amp, FITC-biotin–labeled F1ab-LAMP amplicons; SA-DPNs, dye streptavidin (Crimson Red)–coated polymer nanoparticles; NC membrane, nitrocellulose membrane; pSi, nanoporous silicon; Si, silicon; Ag, Silver; Cu, copper; Au, gold; PET-PE, polyethylene terephthalate-polyethylene; T. sensor, temperature sensor; E. heater, electrical heater; TriSilix, silicon-based integrated point-of-need tri-modal nucleic acid transducer; PPT, plasmonic photothermal; NA, nucleic acid; AuNIs, two-dimensional gold nanoislands)
Recent studies on SARS-CoV-2 diagnosis by biosensors
| Sensor | Nanomaterial | Probe | Subjects | Clinical sample | Primary Ag detection/copy number detection | LOD, sensitivity/specificity | Efficiency | Ref |
|---|---|---|---|---|---|---|---|---|
| FET-based biosensor | Graphene sheets | Ab against SARS-CoV-2 S pro | COVID-19 patients, normal subjects | Nasopharyngeal swab | ELISA, real-time RT-PCR | S pro detection concentration: PBS: 1 fg/ml Clinical transport medium: 100 fg/ml LOD: Culture medium: 1.6 × 101 pfu/ml Clinical samples: 2.42 × 102 copies/ml | Highly sensitive immunological diagnostic method for COVID-19, sample pretreatment-free Labeling-free Distinguishing the SARS-CoV-2 Ag pro from those of MERS-CoV | Giwan Seo et al. ( |
| RT-LAMP-NBS | Dye streptavidin–coated polymer NPs | LAMP primer sets; F1ab and np | Clinically diagnosed COVID-19 patients, non-COVID-19 patients | Oropharynx swab | - | Sensitivity: 12 copies/per reaction Specificity: No cross-reactivity | Sensitivity of SARS-CoV-2 was 100% (33/33), Assay’s specificity was 100% (96/96) The total diagnosis test from sample collection to result interpretation only takes approximately 1 h | Xiong Zhu et al. ( |
| Gr-FET immunosensors | High-quality monolayer single-crystal graphene | CSAb, ACE2 | - | - | - | 0.2-pM concentration | The early screening/diagnosis, fast responding time within 2 min, in a real-time and label-free manner, applied to screen for high-affinity antibodies (CSAb) (with binding constant up to 2×1011 M-1 against the RBD) at concentrations down to 0.1 pM | Xiaoyan Zhang et al. ( |
| Silicon-based TriSilix contain electrochemical sensor | Silicon | PCR primers; reverse and forward | - | cDNA fragments produced synthetically | PCR | Detection of 20 fg, equivalent to a single bacterium, at the 30th cycle. Using TriSilix, we also detected the cDNA from SARS-CoV-2 (1 pg), through PCR | Can chemically amplify and detect pathogen-specific sequences of nucleic acids (NA) quantitatively in real-time Label-free electrochemical sensor | Estefania Nunez-Bajo et al. ( |
Dual-functional plasmonic photothermal biosensors | AuNIs | Nucleic acid hybridization | - | Actual sample | - | 0.22 pM | Allows precise detection of the specific target in a multigene mixture, viral disease diagnosis | Guangyu Qiu et al. ( |
Abbreviations: COVID-19 coronavirus disease 2019, FET field-effect transistor, Ab antibody, PCR polymerase chain reaction, SARS-CoV-2 sever acute respiratory syndrome coronavirus 2, S pro spike protein, LOD limit of detection, Ag pro antigen protein, MERS-CoV middle east acute respiratory syndrome coronavirus, ELISA enzyme-linked immunosorbent assay, RT-LAMP-NBS reverse transcription loop–mediated isothermal amplification coupled with nanoparticle-based biosensor, NPs nanoparticles, np nucleoprotein, CSAb SARS-COV spike S1 subunit protein antibody, Gr-FET graphene field-effect transistor, Gr graphene, RBD receptor binding domain, ACE2 human angiotensin-converting enzyme 2, TriSilix silicon-based integrated point-of-need tri-modal nucleic acid transducer, AuNIs gold nanoislands