Literature DB >> 33708112

Drug Repurposing Screen for Compounds Inhibiting the Cytopathic Effect of SARS-CoV-2.

Catherine Z Chen1, Paul Shinn1, Zina Itkin1, Richard T Eastman1, Robert Bostwick2, Lynn Rasmussen2, Ruili Huang1, Min Shen1, Xin Hu1, Kelli M Wilson1, Brianna M Brooks1, Hui Guo1, Tongan Zhao1, Carleen Klump-Thomas1, Anton Simeonov1, Samuel G Michael1, Donald C Lo1, Matthew D Hall1, Wei Zheng1.   

Abstract

Drug repurposing is a rapid approach to identify therapeutics for the treatment of emerging infectious diseases such as COVID-19. To address the urgent need for treatment options, we carried out a quantitative high-throughput screen using a SARS-CoV-2 cytopathic assay with a compound collection of 8,810 approved and investigational drugs, mechanism-based bioactive compounds, and natural products. Three hundred and nineteen compounds with anti-SARS-CoV-2 activities were identified and confirmed, including 91 approved drugs and 49 investigational drugs. The anti-SARS-CoV-2 activities of 230 of these confirmed compounds, of which 38 are approved drugs, have not been previously reported. Chlorprothixene, methotrimeprazine, and piperacetazine were the three most potent FDA-approved drugs with anti-SARS-CoV-2 activities. These three compounds have not been previously reported to have anti-SARS-CoV-2 activities, although their antiviral activities against SARS-CoV and Ebola virus have been reported. These results demonstrate that this comprehensive data set is a useful resource for drug repurposing efforts, including design of new drug combinations for clinical trials for SARS-CoV-2.
Copyright © 2021 Chen, Shinn, Itkin, Eastman, Bostwick, Rasumussen, Huang, Shen, Hu, Wilson, Brooks, Guo, Zhao, Klump-Thomas, Simeonov, Michael, Lo, Hall and Zheng.

Entities:  

Keywords:  COVID-19; HTS; SARS-CoV-2; cytopathic effect; drug repurposing and discovery

Year:  2021        PMID: 33708112      PMCID: PMC7942396          DOI: 10.3389/fphar.2020.592737

Source DB:  PubMed          Journal:  Front Pharmacol        ISSN: 1663-9812            Impact factor:   5.810


  34 in total

Review 1.  Cellular host factors for SARS-CoV-2 infection.

Authors:  Jim Baggen; Els Vanstreels; Sander Jansen; Dirk Daelemans
Journal:  Nat Microbiol       Date:  2021-09-01       Impact factor: 17.745

2.  Allosteric Binders of ACE2 Are Promising Anti-SARS-CoV-2 Agents.

Authors:  Joshua E Hochuli; Sankalp Jain; Cleber Melo-Filho; Zoe L Sessions; Tesia Bobrowski; Jun Choe; Johnny Zheng; Richard Eastman; Daniel C Talley; Ganesha Rai; Anton Simeonov; Alexander Tropsha; Eugene N Muratov; Bolormaa Baljinnyam; Alexey V Zakharov
Journal:  ACS Pharmacol Transl Sci       Date:  2022-06-22

3.  Phospholipidosis is a shared mechanism underlying the in vitro antiviral activity of many repurposed drugs against SARS-CoV-2.

Authors:  Tia A Tummino; Veronica V Rezelj; Benoit Fischer; Audrey Fischer; Matthew J O'Meara; Blandine Monel; Thomas Vallet; Ziyang Zhang; Assaf Alon; Henry R O'Donnell; Jiankun Lyu; Heiko Schadt; Kris M White; Nevan J Krogan; Laszlo Urban; Kevan M Shokat; Andrew C Kruse; Adolfo García-Sastre; Olivier Schwartz; Francesca Moretti; Marco Vignuzzi; Francois Pognan; Brian K Shoichet
Journal:  bioRxiv       Date:  2021-03-24

4.  Drugmonizome and Drugmonizome-ML: integration and abstraction of small molecule attributes for drug enrichment analysis and machine learning.

Authors:  Eryk Kropiwnicki; John E Evangelista; Daniel J Stein; Daniel J B Clarke; Alexander Lachmann; Maxim V Kuleshov; Minji Jeon; Kathleen M Jagodnik; Avi Ma'ayan
Journal:  Database (Oxford)       Date:  2021-03-31       Impact factor: 4.462

5.  Identification of Plitidepsin as Potent Inhibitor of SARS-CoV-2-Induced Cytopathic Effect After a Drug Repurposing Screen.

Authors:  Jordi Rodon; Jordana Muñoz-Basagoiti; Daniel Perez-Zsolt; Marc Noguera-Julian; Roger Paredes; Lourdes Mateu; Carles Quiñones; Carles Perez; Itziar Erkizia; Ignacio Blanco; Alfonso Valencia; Víctor Guallar; Jorge Carrillo; Julià Blanco; Joaquim Segalés; Bonaventura Clotet; Júlia Vergara-Alert; Nuria Izquierdo-Useros
Journal:  Front Pharmacol       Date:  2021-03-25       Impact factor: 5.810

Review 6.  Recent advances in drug repurposing using machine learning.

Authors:  Fabio Urbina; Ana C Puhl; Sean Ekins
Journal:  Curr Opin Chem Biol       Date:  2021-07-16       Impact factor: 8.822

Review 7.  High-throughput screening assays for SARS-CoV-2 drug development: current status and future directions.

Authors:  Tuan Xu; Wei Zheng; Ruili Huang
Journal:  Drug Discov Today       Date:  2021-05-25       Impact factor: 7.851

8.  Comprehensive Consensus Analysis of SARS-CoV-2 Drug Repurposing Campaigns.

Authors:  Hazem Mslati; Francesco Gentile; Carl Perez; Artem Cherkasov
Journal:  J Chem Inf Model       Date:  2021-07-27       Impact factor: 4.956

9.  A SARS-CoV-2 nucleocapsid protein TR-FRET assay amenable to high-throughput screening.

Authors:  Kirill Gorshkov; Desarey Morales Vasquez; Kevin Chiem; Chengjin Ye; Bruce Nguyen Tran; Juan Carlos de la Torre; Thomas Moran; Catherine Z Chen; Luis Martinez-Sobrido; Wei Zheng
Journal:  bioRxiv       Date:  2021-07-05

10.  Update on Functional Inhibitors of Acid Sphingomyelinase (FIASMAs) in SARS-CoV-2 Infection.

Authors:  Gwenolé Loas; Pascal Le Corre
Journal:  Pharmaceuticals (Basel)       Date:  2021-07-18
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