Literature DB >> 33707338

Response to Edaphoclimatic Conditions and Crop Management of the Bacterial Microbiome of Musa acuminata Rhizosphere Profiled by 16S rRNA Gene Amplicon Sequencing.

Francisco J De la Torre-González1, Elisa Fernández-Castillo1,2, Dailen Azaharez-Llorente3,2, Jorge Lara1, Enrique Avendaño1, Alexis Castañeda1, Sergio Gómez1, José Gaxiola4, Ali Asaff-Torres5,3, Jorge Verdín6.   

Abstract

Bacterial rhizospheric microbiomes of Musa acuminata cultivated in farms close to the west and east Mexican coasts and with different climate, soils, and crop management practices were characterized by 16S rRNA gene amplicon sequencing. Results showed that rhizospheric microbiome composition changed along with seasonal weather but were mostly indifferent to soil type.
Copyright © 2021 De la Torre-González et al.

Entities:  

Year:  2021        PMID： 33707338      PMCID： PMC7953301          DOI： 10.1128/MRA.01437-20

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  8 in total

1.  Stable Microbial Community and Specific Beneficial Taxa Associated.

Authors:  Lin Fu; Yannan Ou; Zongzhuan Shen; Beibei Wang; Rong Li; Qirong Shen
Journal:  J Microbiol Biotechnol       Date:  2019-10-28       Impact factor: 2.351

2.  Diversity of microbiota associated with symptomatic and non-symptomatic bacterial wilt-diseased banana plants determined using 16S rRNA metagenome sequencing.

Authors:  Nurul Shamsinah Mohd Suhaimi; Share-Yuan Goh; Noni Ajam; Rofina Yasmin Othman; Kok-Gan Chan; Kwai Lin Thong
Journal:  World J Microbiol Biotechnol       Date:  2017-08-21       Impact factor: 3.312

3.  Banana-associated microbial communities in Uganda are highly diverse but dominated by Enterobacteriaceae.

Authors:  Bettina Rossmann; Henry Müller; Kornelia Smalla; Samuel Mpiira; John Baptist Tumuhairwe; Charles Staver; Gabriele Berg
Journal:  Appl Environ Microbiol       Date:  2012-05-04       Impact factor: 4.792

4.  Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies.

Authors:  Anna Klindworth; Elmar Pruesse; Timmy Schweer; Jörg Peplies; Christian Quast; Matthias Horn; Frank Oliver Glöckner
Journal:  Nucleic Acids Res       Date:  2012-08-28       Impact factor: 16.971

5.  The SILVA ribosomal RNA gene database project: improved data processing and web-based tools.

Authors:  Christian Quast; Elmar Pruesse; Pelin Yilmaz; Jan Gerken; Timmy Schweer; Pablo Yarza; Jörg Peplies; Frank Oliver Glöckner
Journal:  Nucleic Acids Res       Date:  2012-11-28       Impact factor: 16.971

6.  Lime and ammonium carbonate fumigation coupled with bio-organic fertilizer application steered banana rhizosphere to assemble a unique microbiome against Panama disease.

Authors:  Zongzhuan Shen; Beibei Wang; Jiaxin Zhu; Hangwei Hu; Chengyuan Tao; Yannan Ou; Xuhui Deng; Ning Ling; Rong Li; Qirong Shen
Journal:  Microb Biotechnol       Date:  2019-03-05       Impact factor: 5.813

7.  Metagenomic Insights of the Root Colonizing Microbiome Associated with Symptomatic and Non-Symptomatic Bananas in Fusarium Wilt Infected Fields.

Authors:  Manoj Kaushal; George Mahuku; Rony Swennen
Journal:  Plants (Basel)       Date:  2020-02-18

8.  Unlocking the Microbiome Communities of Banana (Musa spp.) under Disease Stressed (Fusarium wilt) and Non-Stressed Conditions.

Authors:  Manoj Kaushal; Rony Swennen; George Mahuku
Journal:  Microorganisms       Date:  2020-03-20
  8 in total
  1 in total

1.  The core bacterial microbiome of banana (Musa spp.).

Authors:  Henry W G Birt; Anthony B Pattison; Adam Skarshewski; Jeff Daniells; Anil Raghavendra; Paul G Dennis
Journal:  Environ Microbiome       Date:  2022-09-08
  1 in total

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