Literature DB >> 33707326

Genome Sequence of Aspergillus aculeatinus IC_8, Isolated from an Indoor Air Sample of an Urban Housing Complex in Abidjan, Ivory Coast.

Shu Zhao1,2, David Koffi3, Jean-Paul Latge4, Karidia Sylla3, John G Gibbons5,2,6.   

Abstract

Aspergillus aculeatinus is an industrially important species of Aspergillus section Nigri capable of producing bioactive, antibiotic, and antitumor compounds. We sequenced the genome of a strain of A. aculeatinus that was isolated from the interior of a housing complex in Abidjan, Ivory Coast.
Copyright © 2021 Zhao et al.

Entities:  

Year:  2021        PMID： 33707326      PMCID： PMC7953289          DOI： 10.1128/MRA.00096-21

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  11 in total

1.  SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

Authors:  Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal:  J Comput Biol       Date:  2012-04-16       Impact factor: 1.479

2.  FastTree 2--approximately maximum-likelihood trees for large alignments.

Authors:  Morgan N Price; Paramvir S Dehal; Adam P Arkin
Journal:  PLoS One       Date:  2010-03-10       Impact factor: 3.240

3.  BUSCO: Assessing Genome Assembly and Annotation Completeness.

Authors:  Mathieu Seppey; Mosè Manni; Evgeny M Zdobnov
Journal:  Methods Mol Biol       Date:  2019

4.  Two novel species of Aspergillus section Nigri from Thai coffee beans.

Authors:  Paramee Noonim; Warapa Mahakarnchanakul; Janos Varga; Jens C Frisvad; Robert A Samson
Journal:  Int J Syst Evol Microbiol       Date:  2008-07       Impact factor: 2.747

5.  New and revisited species in Aspergillus section Nigri.

Authors:  J Varga; J C Frisvad; S Kocsubé; B Brankovics; B Tóth; G Szigeti; R A Samson
Journal:  Stud Mycol       Date:  2011-06-30       Impact factor: 16.097

6.  OrthoFinder: phylogenetic orthology inference for comparative genomics.

Authors:  David M Emms; Steven Kelly
Journal:  Genome Biol       Date:  2019-11-14       Impact factor: 13.583

7.  Comparative transcriptome analysis of a taxol-producing endophytic fungus, Aspergillus aculeatinus Tax-6, and its mutant strain.

Authors:  Weichuan Qiao; Tianhao Tang; Fei Ling
Journal:  Sci Rep       Date:  2020-06-29       Impact factor: 4.379

8.  OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy.

Authors:  David M Emms; Steven Kelly
Journal:  Genome Biol       Date:  2015-08-06       Impact factor: 13.583

9.  Kraken: a set of tools for quality control and analysis of high-throughput sequence data.

Authors:  Matthew P A Davis; Stijn van Dongen; Cei Abreu-Goodger; Nenad Bartonicek; Anton J Enright
Journal:  Methods       Date:  2013-06-29       Impact factor: 3.608

10.  Genome Sequences of Two Strains of the Food Spoilage Mold Aspergillus fischeri.

Authors:  Shu Zhao; Jean-Paul Latgé; John G Gibbons
Journal:  Microbiol Resour Announc       Date:  2019-12-12
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.