Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Draft Genome Sequence of the Putative Endophytic Bacterium Pantoea agglomerans R6, Associated with Lactuca serriola from South Africa.

Literature DB >> 33707320

Draft Genome Sequence of the Putative Endophytic Bacterium Pantoea agglomerans R6, Associated with Lactuca serriola from South Africa.

Brandon Istain¹, Prudent S Mokgokong², Ruomou Wu¹, Junaid Mia¹, Arun Gokul¹, David Mendoza-Cozatl^3,4, Morné Du Plessis², Marshall Keyster^5,6.

Abstract

Here, we present the draft genome sequence (∼4.7 Mb) of the endopyhtic bacterium Pantoea agglomerans strain R6, which was isolated from surface-sterilized roots of Lactuca serriola (prickly lettuce).

Entities: Chemical Disease Species

Year: 2021 PMID： 33707320 PMCID： PMC7953283 DOI： 10.1128/MRA.00023-21

Source DB: PubMed Journal: Microbiol Resour Announc ISSN： 2576-098X

7 in total

1. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

Authors: Anton Bankevich; Sergey Nurk; Dmitry Antipov; Alexey A Gurevich; Mikhail Dvorkin; Alexander S Kulikov; Valery M Lesin; Sergey I Nikolenko; Son Pham; Andrey D Prjibelski; Alexey V Pyshkin; Alexander V Sirotkin; Nikolay Vyahhi; Glenn Tesler; Max A Alekseyev; Pavel A Pevzner
Journal: J Comput Biol Date: 2012-04-16 Impact factor: 1.479

2. Pantoea agglomerans strain EH318 produces two antibiotics that inhibit Erwinia amylovora in vitro.

Authors: S A Wright; C H Zumoff; L Schneider; S V Beer
Journal: Appl Environ Microbiol Date: 2001-01 Impact factor: 4.792

Review 3. Pantoea agglomerans: a marvelous bacterium of evil and good.Part I. Deleterious effects: Dust-borne endotoxins and allergens - focus on cotton dust.

Authors: Jacek Dutkiewicz; Barbara Mackiewicz; Marta Kinga Lemieszek; Marcin Golec; Janusz Milanowski
Journal: Ann Agric Environ Med Date: 2015 Impact factor: 1.447

Draft Genome Sequence of the Putative Endophytic Bacterium Pantoea agglomerans R6, Associated with Lactuca serriola from South Africa.

1. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.

2. Pantoea agglomerans strain EH318 produces two antibiotics that inhibit Erwinia amylovora in vitro.

Review 3. Pantoea agglomerans: a marvelous bacterium of evil and good.Part I. Deleterious effects: Dust-borne endotoxins and allergens - focus on cotton dust.

4. Pantoea agglomerans, a plant pathogen causing human disease.

5. Taxogenomics and Systematics of the Genus Pantoea.

6. Trimmomatic: a flexible trimmer for Illumina sequence data.