Literature DB >> 33705418

Clustering approach for the analysis of the fluorescent bioaerosol collected by an automatic detector.

Gintautas Daunys1, Laura Šukienė1, Lukas Vaitkevičius1, Gediminas Valiulis1, Mikhail Sofiev1,2, Ingrida Šaulienė1.   

Abstract

Automatically operating particle detection devices generate valuable data, but their use in routine aerobiology needs to be harmonized. The growing network of researchers using automatic pollen detectors has the challenge to develop new data processing systems, best suited for identification of pollen or spore from bioaerosol data obtained near-real-time. It is challenging to recognise all the particles in the atmospheric bioaerosol due to their diversity. In this study, we aimed to find the natural groupings of pollen data by using cluster analysis, with the intent to use these groupings for further interpretation of real-time bioaerosol measurements. The scattering and fluorescence data belonging to 29 types of pollen and spores were first acquired in the laboratory using Rapid-E automatic particle detector. Neural networks were used for primary data processing, and the resulting feature vectors were clustered for scattering and fluorescence modality. Scattering clusters results showed that pollen of the same plant taxa associates with the different clusters corresponding to particle shape and size properties. According to fluorescence clusters, pollen grouping highlighted the possibility to differentiate Dactylis and Secale genera in the Poaceae family. Fluorescent clusters played a more important role than scattering for separating unidentified fluorescent particles from tested pollen. The proposed clustering method aids in reducing the number of false-positive errors.

Entities:  

Year:  2021        PMID: 33705418      PMCID: PMC7951810          DOI: 10.1371/journal.pone.0247284

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  11 in total

1.  Individual bioaerosol particle discrimination by multi-photon excited fluorescence.

Authors:  Denis Kiselev; Luigi Bonacina; Jean-Pierre Wolf
Journal:  Opt Express       Date:  2011-11-21       Impact factor: 3.894

2.  Automatic and Online Pollen Monitoring.

Authors:  Jose Oteros; Gudrun Pusch; Ingrid Weichenmeier; Ulrich Heimann; Rouven Möller; Stefani Röseler; Claudia Traidl-Hoffmann; Carsten Schmidt-Weber; Jeroen T M Buters
Journal:  Int Arch Allergy Immunol       Date:  2015-08-19       Impact factor: 2.749

3.  Cluster analysis of intradiurnal holm oak pollen cycles at peri-urban and rural sampling sites in southwestern Spain.

Authors:  M A Hernández-Ceballos; H García-Mozo; C Galán
Journal:  Int J Biometeorol       Date:  2014-10-16       Impact factor: 3.787

4.  Detecting distant sources of airborne pollen for Poland: Integrating back-trajectory and dispersion modelling with a satellite-based phenology.

Authors:  Paweł Bogawski; Katarzyna Borycka; Łukasz Grewling; Idalia Kasprzyk
Journal:  Sci Total Environ       Date:  2019-06-23       Impact factor: 7.963

Review 5.  Poaceae pollen as the leading aeroallergen worldwide: A review.

Authors:  H García-Mozo
Journal:  Allergy       Date:  2017-06-20       Impact factor: 13.146

6.  Pollen season is reflected on symptom load for grass and birch pollen-induced allergic rhinitis in different geographic areas-An EAACI Task Force Report.

Authors:  Oliver Pfaar; Kostas Karatzas; Katharina Bastl; Uwe Berger; Jeroen Buters; Ulf Darsow; Pascal Demoly; Stephen R Durham; Carmen Galán; Regula Gehrig; Roy Gerth van Wijk; Lars Jacobsen; Nikos Katsifarakis; Ludger Klimek; Annika Saarto; Mikhail Sofiev; Michel Thibaudon; Barbora Werchan; Karl-Christian Bergmann
Journal:  Allergy       Date:  2020-03-01       Impact factor: 13.146

7.  Pollen Season Trends (1973-2013) in Stockholm Area, Sweden.

Authors:  Tomas Lind; Agneta Ekebom; Kerstin Alm Kübler; Pia Östensson; Tom Bellander; Mare Lõhmus
Journal:  PLoS One       Date:  2016-11-29       Impact factor: 3.240

8.  The long-range transport of Pinaceae pollen: an example in Kraków (southern Poland).

Authors:  Kazimierz Szczepanek; Dorota Myszkowska; Elżbieta Worobiec; Katarzyna Piotrowicz; Monika Ziemianin; Zuzanna Bielec-Bąkowska
Journal:  Aerobiologia (Bologna)       Date:  2016-09-23       Impact factor: 2.410

9.  Chemical characterization and identification of Pinaceae pollen by infrared microspectroscopy.

Authors:  Boris Zimmermann
Journal:  Planta       Date:  2017-09-14       Impact factor: 4.116

10.  Pollen and spore monitoring in the world.

Authors:  J T M Buters; C Antunes; A Galveias; K C Bergmann; M Thibaudon; C Galán; C Schmidt-Weber; J Oteros
Journal:  Clin Transl Allergy       Date:  2018-04-04       Impact factor: 5.871

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