Literature DB >> 33704531

Determination of Microbial Diversity and Community Composition in Unfermented and Fermented Washing Rice Water by High-Throughput Sequencing.

Youlin Chen1, Haiming Chen1, Qiuping Zhong1, Yong-Huan Yun1, Weijun Chen2,3, Wenxue Chen4.   

Abstract

Washing rice water (WRW) refers to the sewage produced by rice washing in China and other parts of Asia people's daily life. As in the WRW is rich a variety of nutrients, microorganisms are prone to multiply and pollute the environment. In this article, high-throughput sequencing is used to describe the microbial diversity in different fermentation time WRW. The results showed that the sequencing depth effectively covered the microbial species in the samples, and the bacterial community structure in the samples of WRW at different fermentation periods was rich in diversity. Preominant taxa included Proteobacteria (62%), Firmicutes (28%), approximately Cyanobacteria (10%) and Bacteroidetes (0.5%). The core WRW microbiome comprises Trabulsiella, Pseudomonas, Serratia, Lactobacillus, Erwinia, Enterobacter, Clostridium and Acinetobacter, some of which are potential beneficial microbes. The change of microbial community composition with the change of habitat was assessed. It was found that environmental factors had significant influence on the assembly structure of microbial community.

Entities:  

Year:  2021        PMID: 33704531     DOI: 10.1007/s00284-021-02400-4

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  39 in total

1.  High abundance of ammonia-oxidizing Archaea in coastal waters, determined using a modified DNA extraction method.

Authors:  Hidetoshi Urakawa; Willm Martens-Habbena; David A Stahl
Journal:  Appl Environ Microbiol       Date:  2010-01-29       Impact factor: 4.792

2.  Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample.

Authors:  J Gregory Caporaso; Christian L Lauber; William A Walters; Donna Berg-Lyons; Catherine A Lozupone; Peter J Turnbaugh; Noah Fierer; Rob Knight
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-03       Impact factor: 11.205

Review 3.  Prospects for harnessing biocide resistance for bioremediation and detoxification.

Authors:  Siavash Atashgahi; Irene Sánchez-Andrea; Hermann J Heipieper; Jan R van der Meer; Alfons J M Stams; Hauke Smidt
Journal:  Science       Date:  2018-05-18       Impact factor: 47.728

4.  In vivo hair growth-promoting effect of rice bran extract prepared by supercritical carbon dioxide fluid.

Authors:  Jae-Suk Choi; Min-Hee Jeon; Woi-Sook Moon; Jin-Nam Moon; Eun Jin Cheon; Joo-Wan Kim; Sung Kyu Jung; Yi-Hwa Ji; Sang Wook Son; Mi-Ryung Kim
Journal:  Biol Pharm Bull       Date:  2014       Impact factor: 2.233

5.  Field study reveals core plant microbiota and relative importance of their drivers.

Authors:  Kelly Hamonts; Pankaj Trivedi; Anshu Garg; Caroline Janitz; Jasmine Grinyer; Paul Holford; Frederik C Botha; Ian C Anderson; Brajesh K Singh
Journal:  Environ Microbiol       Date:  2018-01-02       Impact factor: 5.491

6.  Preparation and in vitro antioxidant activity of lacquer polysaccharides with low molecular weights and their sulfated derivatives.

Authors:  Chang Zou; Yumin Du; Yan Li; Jianhong Yang; Le Zhang
Journal:  Int J Biol Macromol       Date:  2009-12-02       Impact factor: 6.953

7.  Improvement in antioxidant functionality and shelf life of yukwa (fried rice snack) by turmeric (Curcuma longa L.) powder addition.

Authors:  Seung-Taik Lim; Jung-Ah Han
Journal:  Food Chem       Date:  2015-12-12       Impact factor: 7.514

8.  Grapevine rootstocks shape underground bacterial microbiome and networking but not potential functionality.

Authors:  Ramona Marasco; Eleonora Rolli; Marco Fusi; Grégoire Michoud; Daniele Daffonchio
Journal:  Microbiome       Date:  2018-01-03       Impact factor: 14.650

9.  Large-scale replicated field study of maize rhizosphere identifies heritable microbes.

Authors:  William A Walters; Zhao Jin; Nicholas Youngblut; Jason G Wallace; Jessica Sutter; Wei Zhang; Antonio González-Peña; Jason Peiffer; Omry Koren; Qiaojuan Shi; Rob Knight; Tijana Glavina Del Rio; Susannah G Tringe; Edward S Buckler; Jeffery L Dangl; Ruth E Ley
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-25       Impact factor: 11.205

10.  MetaLab: an automated pipeline for metaproteomic data analysis.

Authors:  Kai Cheng; Zhibin Ning; Xu Zhang; Leyuan Li; Bo Liao; Janice Mayne; Alain Stintzi; Daniel Figeys
Journal:  Microbiome       Date:  2017-12-02       Impact factor: 14.650

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