Literature DB >> 33694039

Direct next-generation sequencing diagnosis of echovirus 9 meningitis, France.

Madjid Morsli1,2, Jean-Jacques Vincent1,3, Laurine Milliere1,3, Philippe Colson1,2, Michel Drancourt4,5,6.   

Abstract

The prognosis of central nervous system infections caused by enteroviruses partially depends on the viral genotype, which is not provided by current point-of-care diagnostic methods. In this study, next-generation sequencing identified an echovirus 9 directly from the cerebrospinal fluid of a patient presenting with meningitis.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Echovirus; Enterovirus; Genotype; Next-generation sequencing; Point-of-care diagnosis; meningitis

Year:  2021        PMID： 33694039     DOI： 10.1007/s10096-021-04205-6

Source DB:  PubMed          Journal:  Eur J Clin Microbiol Infect Dis        ISSN： 0934-9723            Impact factor:   3.267


  9 in total

1.  Point-of-care multiplexed diagnosis of meningitis using the FilmArray® ME panel technology.

Authors:  Jean-Jacques Vincent; Christine Zandotti; Sophie Baron; Christian Kandil; Pierre-Yves Levy; Michel Drancourt; Didier Raoult; Laetitia Ninove
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2020-05-01       Impact factor: 3.267

2.  An automated genotyping tool for enteroviruses and noroviruses.

Authors:  A Kroneman; H Vennema; K Deforche; H v d Avoort; S Peñaranda; M S Oberste; J Vinjé; M Koopmans
Journal:  J Clin Virol       Date:  2011-04-21       Impact factor: 3.168

Review 3.  Syndromic Panel-Based Testing in Clinical Microbiology.

Authors:  Poornima Ramanan; Alexandra L Bryson; Matthew J Binnicker; Bobbi S Pritt; Robin Patel
Journal:  Clin Microbiol Rev       Date:  2017-11-15       Impact factor: 26.132

Review 4.  Molecular epidemiology of human enterovirus 71 strains and recent outbreaks in the Asia-Pacific region: comparative analysis of the VP1 and VP4 genes.

Authors:  Mary Jane Cardosa; David Perera; Betty A Brown; Doosung Cheon; Hung Ming Chan; Kwai Peng Chan; Haewol Cho; Peter McMinn
Journal:  Emerg Infect Dis       Date:  2003-04       Impact factor: 6.883

Review 5.  Enteroviruses in the early 21st century: new manifestations and challenges.

Authors:  Debra Lugo; Paul Krogstad
Journal:  Curr Opin Pediatr       Date:  2016-02       Impact factor: 2.856

Review 6.  Global epidemiology of nonpolio enteroviruses causing severe neurological complications: A systematic review and meta-analysis.

Authors:  Sarika Suresh; William D Rawlinson; Peter Ian Andrews; Sacha Stelzer-Braid
Journal:  Rev Med Virol       Date:  2019-10-06       Impact factor: 6.989

7.  Microbial culturomics unravels the halophilic microbiota repertoire of table salt: description of Gracilibacillus massiliensis sp. nov.

Authors:  Awa Diop; Saber Khelaifia; Nicholas Armstrong; Noémie Labas; Pierre-Edouard Fournier; Didier Raoult; Matthieu Million
Journal:  Microb Ecol Health Dis       Date:  2016-10-18

8.  Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance.

Authors:  Xianding Deng; Asmeeta Achari; Scot Federman; Guixia Yu; Sneha Somasekar; Inês Bártolo; Shigeo Yagi; Placide Mbala-Kingebeni; Jimmy Kapetshi; Steve Ahuka-Mundeke; Jean-Jacques Muyembe-Tamfum; Asim A Ahmed; Vijay Ganesh; Manasi Tamhankar; Jean L Patterson; Nicaise Ndembi; Dora Mbanya; Lazare Kaptue; Carole McArthur; José E Muñoz-Medina; Cesar R Gonzalez-Bonilla; Susana López; Carlos F Arias; Shaun Arevalo; Steve Miller; Mars Stone; Michael Busch; Kristina Hsieh; Sharon Messenger; Debra A Wadford; Mary Rodgers; Gavin Cloherty; Nuno R Faria; Julien Thézé; Oliver G Pybus; Zoraima Neto; Joana Morais; Nuno Taveira; John R Hackett; Charles Y Chiu
Journal:  Nat Microbiol       Date:  2020-01-13       Impact factor: 17.745

9.  Enterovirus D68 Infection in Children with Acute Flaccid Myelitis, Colorado, USA, 2014.

Authors:  Negar Aliabadi; Kevin Messacar; Daniel M Pastula; Christine C Robinson; Eyal Leshem; James J Sejvar; W Allan Nix; M Steven Oberste; Daniel R Feikin; Samuel R Dominguez
Journal:  Emerg Infect Dis       Date:  2016-08       Impact factor: 6.883
  9 in total
  3 in total

Review 1.  Direct Metagenomic Diagnosis of Community-Acquired Meningitis: State of the Art.

Authors:  Madjid Morsli; Jean Philippe Lavigne; Michel Drancourt
Journal:  Front Microbiol       Date:  2022-07-05       Impact factor: 6.064

2.  A Tetragenococcus halophilus human gut isolate.

Authors:  Cheick Oumar Guindo; Madjid Morsli; Sara Bellali; Michel Drancourt; Ghiles Grine
Journal:  Curr Res Microb Sci       Date:  2022-02-16

3.  Direct Diagnosis of Echovirus 12 Meningitis Using Metagenomic Next Generation Sequencing.

Authors:  Madjid Morsli; Christine Zandotti; Aurelie Morand; Philippe Colson; Michel Drancourt
Journal:  Pathogens       Date:  2021-05-17
  3 in total

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