Literature DB >> 33692953

An Effective Hypoxia-Related Long Non-Coding RNAs Assessment Model for Prognosis of Clear Cell Renal Carcinoma.

Han Zhang1,2, Chuan Qin3, Hua Wen Liu2, Xiong Guo4, Hua Gan1.   

Abstract

Hypoxia is a significant clinical feature and regulates various tumor processes in clear cell renal carcinoma (ccRCC). Increasing evidence has demonstrated that long non-coding RNAs (lncRNAs) are closely associated with the survival outcomes of ccRCC patients and regulates hypoxia-induced tumor processes. Thus, this study aimed to develop a hypoxia-related lncRNA (HRL) prognostic model for predicting the survival outcomes in ccRCC. LncRNAs in ccRCC samples were extracted from The Cancer Genome Atlas database. Hypoxia-related genes were downloaded from the Molecular Signatures Database. A co-expression analysis between differentially expressed lncRNAs and hypoxia-related genes in ccRCC samples was performed to identify HRLs. Univariate and multivariate Cox regression analyses were performed to select nine optimal lncRNAs for developing the HRL model. The prognostic model showed good performance in predicting prognosis among patients with ccRCC, and the validation sets reached consistent results. The model was also found to be related to the clinicopathologic parameters of tumor grade and tumor stage and to tumor immune infiltration. In conclusion, our findings indicate that the hypoxia-lncRNA assessment model may be useful for prognostication in ccRCC cases. Furthermore, the nine HRLs included in the model might be useful targets for investigating the tumorigenesis of ccRCC and designing individualized treatment strategies.
Copyright © 2021 Zhang, Qin, Liu, Guo and Gan.

Entities:  

Keywords:  biomarker; clear cell renal carcinoma; hypoxia; long non-coding RNA; prognosis

Year:  2021        PMID: 33692953      PMCID: PMC7937891          DOI: 10.3389/fonc.2021.616722

Source DB:  PubMed          Journal:  Front Oncol        ISSN: 2234-943X            Impact factor:   6.244


  7 in total

1.  Construction and Verification of a Hypoxia-Related 4-lncRNA Model for Prediction of Breast Cancer.

Authors:  Ye Zhao; Lixiao Liu; Jinduo Zhao; Xuedan Du; Qiongjie Yu; Jinting Wu; Bin Wang; Rongying Ou
Journal:  Int J Gen Med       Date:  2021-08-17

2.  Hypoxia-related LncRNAs signature predicts prognosis and is associated with immune infiltration and progress of head and neck squamous cell carcinoma.

Authors:  Minhan Li; Shaowei Mao; Lixing Li; Muyun Wei
Journal:  Biochem Biophys Rep       Date:  2022-07-06

3.  A novel 7‑hypoxia‑related long non‑coding RNA signature associated with prognosis and proliferation in melanoma.

Authors:  Yi Luo; Tinghao Li; Hengguang Zhao; Aijun Chen
Journal:  Mol Med Rep       Date:  2022-06-15       Impact factor: 3.423

Review 4.  The Effect of Hypoxia and Hypoxia-Associated Pathways in the Regulation of Antitumor Response: Friends or Foes?

Authors:  Raefa Abou Khouzam; Rania Faouzi Zaarour; Klaudia Brodaczewska; Bilal Azakir; Goutham Hassan Venkatesh; Jerome Thiery; Stéphane Terry; Salem Chouaib
Journal:  Front Immunol       Date:  2022-02-08       Impact factor: 7.561

5.  An Effective Hypoxia-Related Long Non-Coding RNA Assessment Model for Prognosis of Lung Adenocarcinoma.

Authors:  Yuanshuai Li; Xiaofang Sun
Journal:  Front Genet       Date:  2022-03-16       Impact factor: 4.599

6.  A Metastasis-Related lncRNA Signature Correlates With the Prognosis in Clear Cell Renal Cell Carcinoma.

Authors:  Qian Dou; Shun Gao; Hua Gan; Zhao Kang; Han Zhang; Yichun Yang; Hang Tong
Journal:  Front Oncol       Date:  2021-06-03       Impact factor: 6.244

7.  An immune-related lncRNA risk coefficient model to predict the outcomes in clear cell renal cell carcinoma.

Authors:  Cheng Tang; GenYi Qu; Yong Xu; Guang Yang; Jiawei Wang; Maolin Xiang
Journal:  Aging (Albany NY)       Date:  2021-12-26       Impact factor: 5.682

  7 in total

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