Literature DB >> 33687268

Flexibilities of wavelets as a computational basis set for large-scale electronic structure calculations.

Laura E Ratcliff1, William Dawson2, Giuseppe Fisicaro3, Damien Caliste4, Stephan Mohr5, Augustin Degomme4, Brice Videau4, Viviana Cristiglio6, Martina Stella1, Marco D'Alessandro7, Stefan Goedecker8, Takahito Nakajima2, Thierry Deutsch4, Luigi Genovese4.   

Abstract

The BigDFT project was started in 2005 with the aim of testing the advantages of using a Daubechies wavelet basis set for Kohn-Sham (KS) density functional theory (DFT) with pseudopotentials. This project led to the creation of the BigDFT code, which employs a computational approach with optimal features of flexibility, performance, and precision of the results. In particular, the employed formalism has enabled the implementation of an algorithm able to tackle DFT calculations of large systems, up to many thousands of atoms, with a computational effort that scales linearly with the number of atoms. In this work, we recall some of the features that have been made possible by the peculiar properties of Daubechies wavelets. In particular, we focus our attention on the usage of DFT for large-scale systems. We show how the localized description of the KS problem, emerging from the features of the basis set, is helpful in providing a simplified description of large-scale electronic structure calculations. We provide some examples on how such a simplified description can be employed, and we consider, among the case-studies, the SARS-CoV-2 main protease.

Entities:  

Year:  2020        PMID: 33687268     DOI: 10.1063/5.0004792

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  4 in total

1.  Improving the Efficiency of Variationally Enhanced Sampling with Wavelet-Based Bias Potentials.

Authors:  Benjamin Pampel; Omar Valsson
Journal:  J Chem Theory Comput       Date:  2022-06-28       Impact factor: 6.578

Review 2.  Modelling Interfaces in Thin-Film Photovoltaic Devices.

Authors:  Michael D K Jones; James A Dawson; Stephen Campbell; Vincent Barrioz; Lucy D Whalley; Yongtao Qu
Journal:  Front Chem       Date:  2022-06-21       Impact factor: 5.545

Review 3.  Implicit Solvation Methods for Catalysis at Electrified Interfaces.

Authors:  Stefan Ringe; Nicolas G Hörmann; Harald Oberhofer; Karsten Reuter
Journal:  Chem Rev       Date:  2021-12-20       Impact factor: 72.087

4.  Transition-Based Constrained DFT for the Robust and Reliable Treatment of Excitations in Supramolecular Systems.

Authors:  Martina Stella; Kritam Thapa; Luigi Genovese; Laura E Ratcliff
Journal:  J Chem Theory Comput       Date:  2022-04-26       Impact factor: 6.578

  4 in total

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