Literature DB >> 33686854

Liquid-Liquid Phase Separation of Tau Protein Is Encoded at the Monomeric Level.

Xuewei Dong1, Santu Bera2, Qin Qiao3, Yiming Tang1, Zenghui Lao1, Yin Luo1, Ehud Gazit2, Guanghong Wei1.   

Abstract

Liquid-liquid phase separation (LLPS) is involved in both physiological and pathological processes. The intrinsically disordered protein Tau and its K18 construct can undergo LLPS in a distinct temperature-dependent manner, and the LLPS of Tau protein can initiate Tau aggregation. However, the underlying mechanism driving Tau LLPS remains largely elusive. To understand the temperature-dependent LLPS behavior of Tau at the monomeric level, we explored the conformational ensemble of Tau at different temperatures by performing all-atom replica-exchange molecular dynamic simulation on K18 monomer with an accumulated simulation time of 26.4 μs. Our simulation demonstrates that the compactness, β-structure propensity, and intramolecular interaction of K18 monomer exhibit nonlinear temperature-dependent behavior. 295DNIKHV300/326GNIHHK331/337VEVKSE342 make significant contributions to the temperature dependence of the β propensity of K18 monomer, while the two fibril-nucleating cores display relatively high β propensity at all temperatures. At a specific temperature, K18 monomer adopts the most collapsed state with exposed sites for both persistent and transient interactions. Given that more collapsed polypeptide chains were reported to be more prone to phase separate, our results suggest that K18 monomer inherently possesses conformational characteristics favoring LLPS. Our simulation predicts the importance of 295DNIKHV300/326GNIHHK331/337VEVKSE342 to the temperature-dependent conformational properties of K18, which is corroborated by CD spectra, turbidity assays, and DIC microscopy. Taken together, we offer a computational and experimental approach to comprehend the structural basis for LLPS by amyloidal building blocks.

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Year:  2021        PMID: 33686854     DOI: 10.1021/acs.jpclett.1c00208

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  7 in total

1.  Structurally Distinct Polymorphs of Tau Aggregates Revealed by Nanoscale Infrared Spectroscopy.

Authors:  Siddhartha Banerjee; Ayanjeet Ghosh
Journal:  J Phys Chem Lett       Date:  2021-11-08       Impact factor: 6.475

2.  Molecular organization of the early stages of nucleosome phase separation visualized by cryo-electron tomography.

Authors:  Meng Zhang; César Díaz-Celis; Bibiana Onoa; Cristhian Cañari-Chumpitaz; Katherinne I Requejo; Jianfang Liu; Michael Vien; Eva Nogales; Gang Ren; Carlos Bustamante
Journal:  Mol Cell       Date:  2022-07-30       Impact factor: 19.328

3.  Shelterin Components Modulate Nucleic Acids Condensation and Phase Separation in the Context of Telomeric DNA.

Authors:  Andrea Soranno; J Jeremías Incicco; Paolo De Bona; Eric J Tomko; Eric A Galburt; Alex S Holehouse; Roberto Galletto
Journal:  J Mol Biol       Date:  2022-06-17       Impact factor: 6.151

4.  Sequence-Dependent Backbone Dynamics of Intrinsically Disordered Proteins.

Authors:  Souvik Dey; Matthew MacAinsh; Huan-Xiang Zhou
Journal:  J Chem Theory Comput       Date:  2022-09-09       Impact factor: 6.578

Review 5.  Tau liquid-liquid phase separation in neurodegenerative diseases.

Authors:  Solomiia Boyko; Witold K Surewicz
Journal:  Trends Cell Biol       Date:  2022-02-15       Impact factor: 21.167

6.  Misfolding and Self-Assembly Dynamics of Microtubule-Binding Repeats of the Alzheimer-Related Protein Tau.

Authors:  Huan He; Yuying Liu; Yunxiang Sun; Feng Ding
Journal:  J Chem Inf Model       Date:  2021-05-25       Impact factor: 6.162

7.  Atomistic Simulation of Lysozyme in Solutions Crowded by Tetraethylene Glycol: Force Field Dependence.

Authors:  Donglin Liu; Yejie Qiu; Qing Li; Haiyang Zhang
Journal:  Molecules       Date:  2022-03-25       Impact factor: 4.411

  7 in total

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