Literature DB >> 33686078

Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain.

Jussi Kupari1, Dmitry Usoskin1, Marc Parisien2, Daohua Lou1, Yizhou Hu1, Michael Fatt1, Peter Lönnerberg1, Mats Spångberg3, Bengt Eriksson3, Nikolaos Barkas4, Peter V Kharchenko4, Karin Loré5,6, Samar Khoury2, Luda Diatchenko7, Patrik Ernfors8.   

Abstract

Distinct types of dorsal root ganglion sensory neurons may have unique contributions to chronic pain. Identification of primate sensory neuron types is critical for understanding the cellular origin and heritability of chronic pain. However, molecular insights into the primate sensory neurons are missing. Here we classify non-human primate dorsal root ganglion sensory neurons based on their transcriptome and map human pain heritability to neuronal types. First, we identified cell correlates between two major datasets for mouse sensory neuron types. Machine learning exposes an overall cross-species conservation of somatosensory neurons between primate and mouse, although with differences at individual gene level, highlighting the importance of primate data for clinical translation. We map genomic loci associated with chronic pain in human onto primate sensory neuron types to identify the cellular origin of chronic pain. Genome-wide associations for chronic pain converge on two different neuronal types distributed between pain disorders that display different genetic susceptibilities, suggesting both unique and shared mechanisms between different pain conditions.

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Year:  2021        PMID: 33686078      PMCID: PMC7940623          DOI: 10.1038/s41467-021-21725-z

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   17.694


  88 in total

1.  Dependence on the transcription factor Shox2 for specification of sensory neurons conveying discriminative touch.

Authors:  Hind Abdo; Lili Li; Francois Lallemend; Isabelle Bachy; Xiao-Jun Xu; Frank L Rice; Patrik Ernfors
Journal:  Eur J Neurosci       Date:  2011-11       Impact factor: 3.386

2.  Electrophysiological and transcriptomic correlates of neuropathic pain in human dorsal root ganglion neurons.

Authors:  Robert Y North; Yan Li; Pradipta Ray; Laurence D Rhines; Claudio Esteves Tatsui; Ganesh Rao; Caj A Johansson; Hongmei Zhang; Yeun Hee Kim; Bo Zhang; Gregory Dussor; Tae Hoon Kim; Theodore J Price; Patrick M Dougherty
Journal:  Brain       Date:  2019-05-01       Impact factor: 13.501

3.  Voltage-gated Na+ currents in human dorsal root ganglion neurons.

Authors:  Xiulin Zhang; Birgit T Priest; Inna Belfer; Michael S Gold
Journal:  Elife       Date:  2017-05-16       Impact factor: 8.140

4.  Mechanisms of itch evoked by β-alanine.

Authors:  Qin Liu; Parul Sikand; Chao Ma; Zongxiang Tang; Liang Han; Zhe Li; Shuohao Sun; Robert H LaMotte; Xinzhong Dong
Journal:  J Neurosci       Date:  2012-10-17       Impact factor: 6.167

Review 5.  Genetic predictors of human chronic pain conditions.

Authors:  Katerina Zorina-Lichtenwalter; C B Meloto; S Khoury; L Diatchenko
Journal:  Neuroscience       Date:  2016-04-30       Impact factor: 3.590

6.  Substance P, neurofilament, peripherin and SSEA4 immunocytochemistry of human dorsal root ganglion neurons obtained from post-mortem tissue: a quantitative morphometric analysis.

Authors:  L C Holford; P Case; S N Lawson
Journal:  J Neurocytol       Date:  1994-09

7.  Mutations in SCN9A, encoding a sodium channel alpha subunit, in patients with primary erythermalgia.

Authors:  Y Yang; Y Wang; S Li; Z Xu; H Li; L Ma; J Fan; D Bu; B Liu; Z Fan; G Wu; J Jin; B Ding; X Zhu; Y Shen
Journal:  J Med Genet       Date:  2004-03       Impact factor: 6.318

8.  Transcriptional regulator PRDM12 is essential for human pain perception.

Authors:  Ya-Chun Chen; Michaela Auer-Grumbach; Shinya Matsukawa; Manuela Zitzelsberger; Andreas C Themistocleous; Tim M Strom; Chrysanthi Samara; Adrian W Moore; Lily Ting-Yin Cho; Gareth T Young; Caecilia Weiss; Maria Schabhüttl; Rolf Stucka; Annina B Schmid; Yesim Parman; Luitgard Graul-Neumann; Wolfram Heinritz; Eberhard Passarge; Rosemarie M Watson; Jens Michael Hertz; Ute Moog; Manuela Baumgartner; Enza Maria Valente; Diego Pereira; Carlos M Restrepo; Istvan Katona; Marina Dusl; Claudia Stendel; Thomas Wieland; Fay Stafford; Frank Reimann; Katja von Au; Christian Finke; Patrick J Willems; Michael S Nahorski; Samiha S Shaikh; Ofélia P Carvalho; Adeline K Nicholas; Gulshan Karbani; Maeve A McAleer; Maria Roberta Cilio; John C McHugh; Sinead M Murphy; Alan D Irvine; Uffe Birk Jensen; Reinhard Windhager; Joachim Weis; Carsten Bergmann; Bernd Rautenstrauss; Jonathan Baets; Peter De Jonghe; Mary M Reilly; Regina Kropatsch; Ingo Kurth; Roman Chrast; Tatsuo Michiue; David L H Bennett; C Geoffrey Woods; Jan Senderek
Journal:  Nat Genet       Date:  2015-05-25       Impact factor: 38.330

9.  Characterizing the replicability of cell types defined by single cell RNA-sequencing data using MetaNeighbor.

Authors:  Megan Crow; Anirban Paul; Sara Ballouz; Z Josh Huang; Jesse Gillis
Journal:  Nat Commun       Date:  2018-02-28       Impact factor: 14.919

10.  An Atlas of Vagal Sensory Neurons and Their Molecular Specialization.

Authors:  Jussi Kupari; Martin Häring; Eneritz Agirre; Gonçalo Castelo-Branco; Patrik Ernfors
Journal:  Cell Rep       Date:  2019-05-21       Impact factor: 9.423

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  33 in total

Review 1.  A functional subdivision within the somatosensory system and its implications for pain research.

Authors:  Qiufu Ma
Journal:  Neuron       Date:  2022-01-10       Impact factor: 17.173

2.  c-Kit Receptor Maintains Sensory Axon Innervation of the Skin through Src Family Kinases.

Authors:  Adam M Tuttle; Matthew B Pomaville; Katherine C Delgado; Kevin M Wright; Alex V Nechiporuk
Journal:  J Neurosci       Date:  2022-07-25       Impact factor: 6.709

3.  Voltage-gated calcium currents in human dorsal root ganglion neurons.

Authors:  Jane E Hartung; Jamie K Moy; Emanuel Loeza-Alcocer; Vidhya Nagarajan; Ruth Jostock; Thomas Christoph; Wolfgang Schroeder; Michael S Gold
Journal:  Pain       Date:  2021-08-27       Impact factor: 7.926

Review 4.  Genetic pain loss disorders.

Authors:  Annette Lischka; Petra Lassuthova; Arman Çakar; Christopher J Record; Jonas Van Lent; Jonathan Baets; Maike F Dohrn; Jan Senderek; Angelika Lampert; David L Bennett; John N Wood; Vincent Timmerman; Thorsten Hornemann; Michaela Auer-Grumbach; Yesim Parman; Christian A Hübner; Miriam Elbracht; Katja Eggermann; C Geoffrey Woods; James J Cox; Mary M Reilly; Ingo Kurth
Journal:  Nat Rev Dis Primers       Date:  2022-06-16       Impact factor: 65.038

5.  The impact of C-tactile low-threshold mechanoreceptors on affective touch and social interactions in mice.

Authors:  Damien Huzard; Miquel Martin; François Maingret; Jean Chemin; Freddy Jeanneteau; Pierre-François Mery; Pascal Fossat; Emmanuel Bourinet; Amaury François
Journal:  Sci Adv       Date:  2022-06-29       Impact factor: 14.957

6.  The Development of Mechanical Allodynia in Diabetic Rats Revealed by Single-Cell RNA-Seq.

Authors:  Han Zhou; Xiaosheng Yang; Chenlong Liao; Hongjin Chen; Yiwei Wu; Binran Xie; Fukai Ma; WenChuan Zhang
Journal:  Front Mol Neurosci       Date:  2022-05-20       Impact factor: 6.261

Review 7.  The Form and Function of PIEZO2.

Authors:  Marcin Szczot; Alec R Nickolls; Ruby M Lam; Alexander T Chesler
Journal:  Annu Rev Biochem       Date:  2021-06-20       Impact factor: 23.643

8.  Advancing our understanding of the neural control of the female human urethra.

Authors:  Claire C Yang; James A Hokanson; Janet R Keast
Journal:  Neurourol Urodyn       Date:  2021-10-04       Impact factor: 2.696

9.  Nociception, Transcriptomics ET CETERA: NOCICEPTRA.

Authors:  Natja Haag; Angelika Lampert
Journal:  Pflugers Arch       Date:  2022-02-24       Impact factor: 3.657

Review 10.  Studying human nociceptors: from fundamentals to clinic.

Authors:  Steven J Middleton; Allison M Barry; Maddalena Comini; Yan Li; Pradipta R Ray; Stephanie Shiers; Andreas C Themistocleous; Megan L Uhelski; Xun Yang; Patrick M Dougherty; Theodore J Price; David L Bennett
Journal:  Brain       Date:  2021-06-22       Impact factor: 15.255

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