Literature DB >> 33682792

Structural analysis of the Sulfolobus solfataricus TF55β chaperonin by cryo-electron microscopy.

Yi Cheng Zeng1, Meghna Sobti1, Alastair G Stewart1.   

Abstract

Chaperonins are biomolecular complexes that assist in protein folding. Thermophilic factor 55 (TF55) is a group II chaperonin found in the archaeal genus Sulfolobus that has α, β and γ subunits. Using cryo-electron microscopy, structures of the β-only complex of S. solfataricus TF55 (TF55β) were determined to 3.6-4.2 Å resolution. The structures of the TF55β complexes formed in the presence of ADP or ATP highlighted an open state in which nucleotide exchange can occur before progressing in the refolding cycle.

Entities:  

Keywords:  chaperonins; cryo-electron microscopy

Mesh:

Substances:

Year:  2021        PMID: 33682792      PMCID: PMC7938637          DOI: 10.1107/S2053230X21002223

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  27 in total

1.  Structural and Functional Insights into the Evolution and Stress Adaptation of Type II Chaperonins.

Authors:  Jessica J Chaston; Callum Smits; David Aragão; Andrew S W Wong; Bilal Ahsan; Sara Sandin; Sudheer K Molugu; Sanjay K Molugu; Ricardo A Bernal; Daniela Stock; Alastair G Stewart
Journal:  Structure       Date:  2016-02-04       Impact factor: 5.006

2.  Quantitative analysis of cryo-EM density map segmentation by watershed and scale-space filtering, and fitting of structures by alignment to regions.

Authors:  Grigore D Pintilie; Junjie Zhang; Thomas D Goddard; Wah Chiu; David C Gossard
Journal:  J Struct Biol       Date:  2010-03-23       Impact factor: 2.867

Review 3.  Chaperonins: The hunt for the Group II mechanism.

Authors:  Maria Giulia Bigotti; Anthony R Clarke
Journal:  Arch Biochem Biophys       Date:  2008-03-22       Impact factor: 4.013

Review 4.  Dynamics, flexibility, and allostery in molecular chaperonins.

Authors:  Lars Skjærven; Jorge Cuellar; Aurora Martinez; José María Valpuesta
Journal:  FEBS Lett       Date:  2015-06-30       Impact factor: 4.124

5.  cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination.

Authors:  Ali Punjani; John L Rubinstein; David J Fleet; Marcus A Brubaker
Journal:  Nat Methods       Date:  2017-02-06       Impact factor: 28.547

Review 6.  Structure and allostery of the chaperonin GroEL.

Authors:  Helen R Saibil; Wayne A Fenton; Daniel K Clare; Arthur L Horwich
Journal:  J Mol Biol       Date:  2012-11-24       Impact factor: 5.469

7.  Staggered ATP binding mechanism of eukaryotic chaperonin TRiC (CCT) revealed through high-resolution cryo-EM.

Authors:  Yunxiang Zang; Mingliang Jin; Huping Wang; Zhicheng Cui; Liangliang Kong; Caixuan Liu; Yao Cong
Journal:  Nat Struct Mol Biol       Date:  2016-10-24       Impact factor: 15.369

8.  ATP-triggered conformational changes delineate substrate-binding and -folding mechanics of the GroEL chaperonin.

Authors:  Daniel K Clare; Daven Vasishtan; Scott Stagg; Joel Quispe; George W Farr; Maya Topf; Arthur L Horwich; Helen R Saibil
Journal:  Cell       Date:  2012-03-22       Impact factor: 41.582

Review 9.  Dynamic Complexes in the Chaperonin-Mediated Protein Folding Cycle.

Authors:  Celeste Weiss; Fady Jebara; Shahar Nisemblat; Abdussalam Azem
Journal:  Front Mol Biosci       Date:  2016-12-08

10.  Positive-unlabeled convolutional neural networks for particle picking in cryo-electron micrographs.

Authors:  Tristan Bepler; Andrew Morin; Micah Rapp; Julia Brasch; Lawrence Shapiro; Alex J Noble; Bonnie Berger
Journal:  Nat Methods       Date:  2019-10-07       Impact factor: 28.547

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