Literature DB >> 33682368

Micro-morphological feature visualization, auto-classification, and evolution quantitative analysis of tumors by using SR-PCT.

Gong-Xiang Wei1,2, Yun-Yan Liu1,2, Xue-Wen Ji2,3, Qiao-Xin Li2,4, Yan Xing2,5, Yan-Ling Xue6, Hui-Qiang Liu1,2.   

Abstract

Tissue micro-morphological abnormalities and interrelated quantitative data can provide immediate evidences for tumorigenesis and metastasis in microenvironment. However, the multiscale three-dimensional nondestructive pathological visualization, measurement, and quantitative analysis are still a challenging for the medical imaging and diagnosis. In this work, we employed the synchrotron-based X-ray phase-contrast tomography (SR-PCT) combined with phase-and-attenuation duality phase retrieval to reconstruct and extract the volumetric inner-structural characteristics of tumors in digesting system, helpful for tumor typing and statistic calculation of different tumor specimens. On the basis of the feature set including eight types of tumor micro-lesions presented by our SR-PCT reconstruction with high density resolution, the AlexNet-based deep convolutional neural network model was trained and obtained the 94.21% of average accuracy of auto-classification for the eight types of tumors in digesting system. The micro-pathomophological relationship of liver tumor angiogenesis and progression were revealed by quantitatively analyzing the microscopic changes of texture and grayscale features screened by a machine learning method of area under curve and principal component analysis. The results showed the specific path and clinical manifestations of tumor evolution and indicated that these progressions of tumor lesions rely on its inflammation microenvironment. Hence, this high phase-contrast 3D pathological characteristics and automatic analysis methods exhibited excellent recognizable and classifiable for micro tumor lesions.
© 2021 The Authors. Cancer Medicine published by John Wiley & Sons Ltd.

Entities:  

Keywords:  angiogenesis; liver cancer; microenvironment; pathology

Mesh:

Year:  2021        PMID: 33682368      PMCID: PMC7982622          DOI: 10.1002/cam4.3796

Source DB:  PubMed          Journal:  Cancer Med        ISSN: 2045-7634            Impact factor:   4.452


  20 in total

1.  Technical Note: Synchrotron-based high-energy x-ray phase sensitive microtomography for biomedical research.

Authors:  Huiqiang Liu; Xizeng Wu; Tiqiao Xiao
Journal:  Med Phys       Date:  2015-10       Impact factor: 4.071

2.  Synchrotron tomographic images from human lung adenocarcinoma: Three-dimensional reconstruction and histologic correlations.

Authors:  Eunjue Yi; Sung-Mi Han; Ji-Eun Chang; Hong-Tae Kim; Jong-Ki Kim; Seung-Jun Seo; Jin-Haeng Chung; Sanghoon Jheon
Journal:  Microsc Res Tech       Date:  2017-07-21       Impact factor: 2.769

3.  Study on diagnosis criteria of fire-heat syndrome based on receiver operating characteristic curve and principal component analysis.

Authors:  Si-jun Liu; Zhao-sheng Huang; Qing-guang Wu; Zhang-jie Huang; Li-rong Wu; Wen-li Yan; Qi Wang; Zong-wei Wang; David Lungpao Chang; Zheng Yang
Journal:  Chin J Integr Med       Date:  2014-12-18       Impact factor: 1.978

4.  Quantitative characterization and diagnosis via hard X-ray phase-contrast microtomography.

Authors:  Huiqiang Liu; Xuewen Ji; Yan Ma; Guohao Du; Yanan Fu; Yibanu Abudureheman; Wenya Liu
Journal:  Microsc Res Tech       Date:  2018-09-20       Impact factor: 2.769

Review 5.  Accessories to the crime: functions of cells recruited to the tumor microenvironment.

Authors:  Douglas Hanahan; Lisa M Coussens
Journal:  Cancer Cell       Date:  2012-03-20       Impact factor: 31.743

Review 6.  Non-angiogenic tumours and their influence on cancer biology.

Authors:  Tom Donnem; Andrew R Reynolds; Elizabeth A Kuczynski; Kevin Gatter; Peter B Vermeulen; Robert S Kerbel; Adrian L Harris; Francesco Pezzella
Journal:  Nat Rev Cancer       Date:  2018-03-09       Impact factor: 60.716

Review 7.  Cooperation among cancer cells: applying game theory to cancer.

Authors:  Marco Archetti; Kenneth J Pienta
Journal:  Nat Rev Cancer       Date:  2019-02       Impact factor: 60.716

8.  Principal component-based feature selection for tumor classification.

Authors:  Lin Sun; Jiucheng Xu; Ying Yin
Journal:  Biomed Mater Eng       Date:  2015       Impact factor: 1.300

9.  Alveolar echinococcosis: correlation between hepatic MRI findings and FDG-PET/CT metabolic activity.

Authors:  Amel Azizi; Oleg Blagosklonov; Ahmed Lounis; Louis Berthet; Dominique-Angèle Vuitton; Solange Bresson-Hadni; Eric Delabrousse
Journal:  Abdom Imaging       Date:  2015-01

10.  Automatic classification of ovarian cancer types from cytological images using deep convolutional neural networks.

Authors:  Miao Wu; Chuanbo Yan; Huiqiang Liu; Qian Liu
Journal:  Biosci Rep       Date:  2018-05-08       Impact factor: 3.840

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