Literature DB >> 33681170

Recent Advances in Silent Gene Cluster Activation in Streptomyces.

Zhenyu Liu1, Yatong Zhao1, Chaoqun Huang1, Yunzi Luo1,2.   

Abstract

Natural products (NPs) are critical sources of drug molecules for decades. About two-thirds of natural antibiotics are produced by Streptomyces. Streptomyces have a large number of secondary metabolite biosynthetic gene clusters (SM-BGCs) that may encode NPs. However, most of these BGCs are silent under standard laboratory conditions. Hence, activation of these silent BGCs is essential to current natural products discovery research. In this review, we described the commonly used strategies for silent BGC activation in Streptomyces from two aspects. One focused on the strategies applied in heterologous host, including methods to clone and reconstruct BGCs along with advances in chassis engineering; the other focused on methods applied in native host which includes engineering of promoters, regulatory factors, and ribosomes. With the metabolic network being elucidated more comprehensively and methods optimized more high-thoroughly, the discovery of NPs will be greatly accelerated.
Copyright © 2021 Liu, Zhao, Huang and Luo.

Entities:  

Keywords:  Streptomyces; biosynthetic gene cluster; heterologous expression; in situ activation; natural products; synthetic biology

Year:  2021        PMID: 33681170      PMCID: PMC7930741          DOI: 10.3389/fbioe.2021.632230

Source DB:  PubMed          Journal:  Front Bioeng Biotechnol        ISSN: 2296-4185


  11 in total

Review 1.  Fungal Endophytes: A Potential Source of Antibacterial Compounds.

Authors:  Sunil K Deshmukh; Laurent Dufossé; Hemraj Chhipa; Sanjai Saxena; Girish B Mahajan; Manish Kumar Gupta
Journal:  J Fungi (Basel)       Date:  2022-02-08

2.  Regulated Expression of an Environmental DNA-Derived Type II Polyketide Gene Cluster in Streptomyces Hosts Identified a New Tetracenomycin Derivative TCM Y.

Authors:  Lishuang Nie; Mingming Cao; Qingqing Ji; Yuejiao Gao; Shaochen Wang; Yunbin Lyu; Zhiyang Feng
Journal:  Curr Microbiol       Date:  2022-10-06       Impact factor: 2.343

3.  Multiplexed Promoter Engineering for Improving Thaxtomin A Production in Heterologous Streptomyces Hosts.

Authors:  Xuejin Zhao; Yeqing Zong; Weijia Wei; Chunbo Lou
Journal:  Life (Basel)       Date:  2022-05-06

Review 4.  Harnessing ortho-Quinone Methides in Natural Product Biosynthesis and Biocatalysis.

Authors:  Trevor N Purdy; Bradley S Moore; April L Lukowski
Journal:  J Nat Prod       Date:  2022-02-02       Impact factor: 4.803

5.  Activation and Identification of a Griseusin Cluster in Streptomyces sp. CA-256286 by Employing Transcriptional Regulators and Multi-Omics Methods.

Authors:  Charlotte Beck; Tetiana Gren; Francisco Javier Ortiz-López; Tue Sparholt Jørgensen; Daniel Carretero-Molina; Jesús Martín Serrano; José R Tormo; Daniel Oves-Costales; Eftychia E Kontou; Omkar S Mohite; Erik Mingyar; Evi Stegmann; Olga Genilloud; Tilmann Weber
Journal:  Molecules       Date:  2021-10-30       Impact factor: 4.411

6.  Production of Epoxyketone Peptide-Based Proteasome Inhibitors by Streptomyces sp. BRA-346: Regulation and Biosynthesis.

Authors:  Bruna Domingues Vieira; Henrique Niero; Rafael de Felício; Luiz Fernando Giolo Alves; Cristina Freitas Bazzano; Renata Sigrist; Luciana Costa Furtado; Gabriela Felix Persinoti; Leticia Veras Costa-Lotufo; Daniela Barretto Barbosa Trivella
Journal:  Front Microbiol       Date:  2022-03-24       Impact factor: 5.640

7.  Streptomyces marincola sp. nov., a Novel Marine Actinomycete, and Its Biosynthetic Potential of Bioactive Natural Products.

Authors:  Songbiao Shi; Linqing Cui; Kun Zhang; Qi Zeng; Qinglian Li; Liang Ma; Lijuan Long; Xinpeng Tian
Journal:  Front Microbiol       Date:  2022-04-28       Impact factor: 5.640

8.  Untargeted Metabolomics Sheds Light on the Secondary Metabolism of Fungi Triggered by Choline-Based Ionic Liquids.

Authors:  Patrícia Sequeira; Maika Rothkegel; Patrícia Domingos; Isabel Martins; Céline C Leclercq; Jenny Renaut; Gustavo H Goldman; Cristina Silva Pereira
Journal:  Front Microbiol       Date:  2022-07-25       Impact factor: 6.064

9.  Complete Genome Sequence of Streptomyces albus Strain G153.

Authors:  Tomoki Takeda; Nodoka Fukumitsu; Satoshi Yuzawa; Kazuharu Arakawa
Journal:  Microbiol Resour Announc       Date:  2022-06-02

Review 10.  Novel Alkaloids from Marine Actinobacteria: Discovery and Characterization.

Authors:  Anne-Sofie De Rop; Jeltien Rombaut; Thomas Willems; Marilyn De Graeve; Lynn Vanhaecke; Paco Hulpiau; Sofie L De Maeseneire; Maarten L De Mol; Wim K Soetaert
Journal:  Mar Drugs       Date:  2021-12-22       Impact factor: 5.118

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