Literature DB >> 33679868

The Comprehensive Analyses of Genomic Variations and Assessment of TMB and PD-L1 Expression in Chinese Lung Adenosquamous Carcinoma.

Yong Cheng1, Yanxiang Zhang2, Yuwei Yuan2, Jiao Wang1, Ke Liu2, Bin Yu1, Li Xie1, Chao Ou-Yang1, Lin Wu2, Xiaoqun Ye1.   

Abstract

The poor prognosis and fewer treatment option is a current clinical challenge for patients with lung adenosquamous carcinoma (ASC). The previous studies reported that tumor mutational burden (TMB, numbers of mutation per Megabase) is a predictor of clinical response in trials of multiple cancer types, while fewer studies assessed the relationship between TMB level and clinical features and outcomes of lung ASC. Herein, the present study enrolled Chinese patients with lung ASC. DNA was extracted from formalin-fixed paraffin-embedded tumor samples and subjected to next generation sequencing (NGS), and the 457 cancer related genes were evaluated. The results demonstrated that 95 unique genes with somatic variations were identified in the enrolled patients. The top three of high frequency gene mutations were TP53, EGFR, PIK3CA with rates of 62% (13 cases), 48% (10 cases), and 14% (3 cases), respectively. We identified TMB value was significantly correlated with pathological stages (p < 0.05) and invasion of lymph node (p < 0.05). However, TMB value was not significantly correlated to other clinicopathologic indexes, for examples, age, sex, smoking history, tumor size, as well as TP53 and EGFR mutations in lung ASC. Moreover, TMB value was associated with the overall survival (p < 0.01), but not with the relapse-free survival (p = 0.23). In conclusion, this study indicated that lung ASC with high TMB might be associated with the invasion of lymph node and short overall survival. Immunotherapy might be a promising treatment option for lung ASC patients with high TMB.
Copyright © 2021 Cheng, Zhang, Yuan, Wang, Liu, Yu, Xie, Ou-Yang, Wu and Ye.

Entities:  

Keywords:  EGFR; PD-L1; TMB; adenosquamous carcinoma; lung; next generation sequencing; somatic variations

Year:  2021        PMID: 33679868      PMCID: PMC7925901          DOI: 10.3389/fgene.2020.609405

Source DB:  PubMed          Journal:  Front Genet        ISSN: 1664-8021            Impact factor:   4.599


  5 in total

Review 1.  Same modification, different location: the mythical role of N6-adenine methylation in plant genomes.

Authors:  Irma A Jiménez-Ramírez; Gema Pijeira-Fernández; Delia M Moreno-Cálix; Clelia De-la-Peña
Journal:  Planta       Date:  2022-06-13       Impact factor: 4.116

2.  Stepwise evolutionary genomics of early-stage lung adenocarcinoma manifesting as pure, heterogeneous and part-solid ground-glass nodules.

Authors:  Hao Li; Zewen Sun; Rongxin Xiao; Qingyi Qi; Xiao Li; Haiyan Huang; Xuan Wang; Jian Zhou; Zhenfan Wang; Ke Liu; Ping Yin; Fan Yang; Jun Wang
Journal:  Br J Cancer       Date:  2022-05-26       Impact factor: 9.075

3.  Developing an Immune-Related Signature for Predicting Survival Rate and the Response to Immune Checkpoint Inhibitors in Patients With Glioma.

Authors:  Sibin Zhang; Xu Xiao; Yu Wang; Tianjun Song; Chenlong Li; Hongbo Bao; Qing Liu; Guiyin Sun; Xiaoyang Sun; Tianqi Su; Tianjiao Fu; Yujie Wang; Peng Liang
Journal:  Front Genet       Date:  2022-06-02       Impact factor: 4.772

Review 4.  PD-L1 Over-Expression Varies in Different Subtypes of Lung Cancer: Will This Affect Future Therapies?

Authors:  Asad Ullah; Steven Pulliam; Nabin Raj Karki; Jaffar Khan; Sana Jogezai; Sandresh Sultan; Lal Muhammad; Marjan Khan; Nimra Jamil; Abdul Waheed; Sami Belakhlef; Intisar Ghleilib; Eric Vail; Saleh Heneidi; Nagla Abdel Karim
Journal:  Clin Pract       Date:  2022-08-24

5.  Comprehensive analyses of genomic features and mutational signatures in adenosquamous carcinoma of the lung.

Authors:  Hongbiao Wang; Jun Liu; Sujuan Zhu; Kun Miao; Zhifeng Li; Xiaofang Qi; Lujia Huang; Lijie Guo; Yan Wang; Yuyin Cai; Yingcheng Lin
Journal:  Front Oncol       Date:  2022-09-14       Impact factor: 5.738

  5 in total

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