| Literature DB >> 33677465 |
Jing Liu1, Limin Cai1, Zepeng Zhang1, Yanli Ma1, Yongchen Wang2.
Abstract
BACKGROUND The association between leptin receptor (LEPR) polymorphisms and keloids is still unclear. Our study aimed to explore the association between LEPR gene polymorphisms and keloids in the Chinese Han population. MATERIAL AND METHODS We implemented a case-control study in a cohort of 352 keloid patients and 299 healthy controls to analyze the correlation between 4 SNPs (rs1137101, rs1938496, rs6588147, and rs7555955) and keloids. Genomic DNA was extracted from peripheral blood by using TGuide M16 (Tiangen). Genotyping of LEPR SNPs was performed using an improved multiple ligase detection reaction (iMLDR) by Shanghai Genesky Bio-Tech Co., Ltd. RESULTS We found that patients caring the AA genotype of rs1137101 and the CC genotype rs1938496 tend to have the increased risk of keloids (P=0.026, P=0.047). Carrying the GA, AA gene type, and G allele frequencies of rs7555955, patients were more likely to have to keloids (P=0.030, P=0.016, P=0.018, respectively). There were no significant differences in genotype distribution and allele frequencies of rs6588147 between cases and controls. The association of rs1137101 and rs7555955 under dominant, recessive, and allele models exhibited significant differences among family-history keloid patients, no-family-history keloid groups, and normal controls (χ²=6.471, P=0.039; χ²=6.477, P=0.039; χ²=6.197, P=0.045, respectively). Similarly, the OR of rs1137101 in the recessive model was significantly higher in patients with a family history of keloids than those in controls. Nonetheless, there are significant ORs of rs1938496 and rs6588147 among the mild-moderate keloid, severe keloid, and control groups. CONCLUSIONS The LEPR gene polymorphisms are associated with keloid formation and severity, especially in patients with a positive family history.Entities:
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Year: 2021 PMID: 33677465 PMCID: PMC7948533 DOI: 10.12659/MSM.928503
Source DB: PubMed Journal: Med Sci Monit ISSN: 1234-1010
Primer sequences of the studied LEPR SNPs.
| SNP | Alleles | MAF (1000g_CHBS) | iMLDR primers sequences |
|---|---|---|---|
| rs1137101 | G/A | 0.13 | F: 5′-TGTGCCAACAGCCAAACTCAAC-3′ |
| rs1938496 | C/T | 0.21 | F: 5′-TGCTTGCCATTATGAAGAACAGC-3′ |
| rs6588147 | G/A | 0.16 | F: 5′-CCAGCCACAAAGAGCAAGGTAGA-3′ |
| rs7555955 | G/A | 0.20 | F: 5′-TGTTTTTCCAAAAGACCTTTGACCA-3′ |
LEPR – leptin receptor; SNP – single nucleotide polymorphism; MAF – minor allele frequency; 1000g_CHBS – minor allele frequencies from HapMap of Han Chinese in Beijing, China(CHB) or Human Genome Project; iMLDR – improved multiple ligase detection reaction; F – forward; R – reverse.
Demographic and clinical characteristics of study subjects.
| Characteristics | Case (n=352) | Control (n=299) | |
|---|---|---|---|
| Age (years) | 32.69±12.19 | 34.16±9.00 | 0.084 |
| Genger (Male/Female) | 169/183 | 146/153 | 0.835 |
| Keloid severity | |||
| Mild-moderate | 282 | ||
| Severe | 70 | ||
| Family history | |||
| Yes | 58 | ||
| No | 294 | ||
n – number.
The frequencies of genotypes and alleles in LEPR gene.
| SNP | Keloid | Normal controls | OR (95% CI) | |||
|---|---|---|---|---|---|---|
| n | % | n | % | |||
| rs1137101 | ||||||
| GA | 68 | 19.32% | 66 | 22.07% | 0.386 | 0.845 (0.578–1.237) |
| GG | 273 | 77.56% | 231 | 77.26% | 0.927 | 1.017 (0.704–1.471) |
| AA | 11 | 3.13% | 2 | 0.67% | 0.026 | 4.790 (1.053–21.785) |
| G | 614 | 87.22% | 528 | 88.29% | 0.105 | 0.760 (0.546–1.059) |
| A | 90 | 12.78% | 70 | 11.71% | ||
| rs1938496 | ||||||
| CT | 111 | 31.53% | 98 | 32.78% | 0.735 | 0.945 (0.679–1.314) |
| CC | 24 | 6.82% | 10 | 3.34% | 0.047 | 2.115 (0.994–4.497) |
| TT | 217 | 61.65% | 191 | 63.88% | 0.557 | 0.909 (0.661–1.251) |
| C | 159 | 22.59% | 118 | 19.73% | 0.210 | 1.187 (0.908–1.551) |
| T | 545 | 77.41% | 480 | 80.27% | ||
| rs6588147 | ||||||
| GA | 83 | 23.58% | 61 | 20.40% | 0.330 | 1.204 (0.828–1.749) |
| GG | 259 | 73.58% | 231 | 77.26% | 0.278 | 0.82 (0.572–1.175) |
| AA | 10 | 2.84% | 7 | 2.34% | 0.690 | 1.220 (0.458–3.245) |
| G | 601 | 85.37% | 523 | 87.46% | 0.274 | 0.837 (0.608–1.152) |
| A | 103 | 14.63% | 75 | 12.54% | ||
| rs7555955 | ||||||
| GA | 108 | 30.68% | 69 | 23.08% | 0.030 | 1.475 (1.038–2.097) |
| GG | 16 | 4.55% | 10 | 3.34% | 0.435 | 1.376 (0.615–3.08) |
| AA | 228 | 64.77% | 220 | 73.58% | 0.016 | 0.660 (0.471–0.925) |
| G | 140 | 19.89% | 89 | 14.88% | 0.018 | 1.420 (1.061–1.900) |
| A | 564 | 80.11% | 509 | 85.12% | ||
LEPR – leptin receptor; SNP – single nucleotide polymorphism; OR – odds ratio; CI – confidence interval; n – number.
Associations between LEPR SNPs and keloid severity.
| SNP | Mild-moderate kleoid | Severe keloid | Normal controls | OR (95% CI) | OR (95% CI) | |||
|---|---|---|---|---|---|---|---|---|
| rs1137101 | ||||||||
| Dominant AA+GA/GG | 60/222 | 19/51 | 68/231 | 0.573 | 0.435 | 1.266 (0.700–2.288) | 0.292 | 0.725 (0.399–1.321) |
| Recessive AA/GA+GG | 6/276 | 5/65 | 2/297 | 0.002 | 0.000 | 11.423 (2.168–60.176) | 0.031 | 0.283 (0.084–0.955) |
| Allele G/A | 498/66 | 116/24 | 528/70 | 0.180 | 0.082 | 0.641 (0.387–1.062) | 0.084 | 1.561 (0.938–2.597) |
| rs1938496 | ||||||||
| Dominant CT+CC/TT | 106/176 | 29/41 | 108/191 | 0.705 | 0.408 | 1.251 (0.736–2.127) | 0.554 | 0.851 (0.500–1.451) |
| Recessive CC/CT+TT | 16/266 | 8/62 | 10/289 | 0.021 | 0.005 | 3.729 (1.415–9.830) | 0.087 | 0.466 (0.191–1.138) |
| Allele C/T | 122/442 | 37/107 | 118/480 | 0.200 | 0.08 | 1.461 (0.954–2.238) | 0.224 | 0.768 (0.502–1.176) |
| rs6588147 | ||||||||
| Dominant GA+AA/GG | 65/217 | 28/42 | 68/231 | 0.007 | 0.003 | 2.265 (1.307–3.923) | 0.004 | 0.449 (0.259–0.781) |
| Recessive AA/GA+GG | 4/278 | 6/64 | 7/292 | 0.003 | 0.011 | 3.911 (1.272–12.028) | 0.001 | 0.153 (0.042–0.560) |
| Allele G/A | 495/69 | 106/34 | 523/75 | 0.001 | 0.000 | 0.447 (0.283–0.705) | 0.000 | 2.301 (1.451–3.649) |
| rs7555955 | ||||||||
| Dominant GA+GG/AA | 90/192 | 34/36 | 79/220 | 0.001 | 0.000 | 2.630 (1.541–4.489) | 0.009 | 0.496 (0.292–0.844) |
| Recessive GG/GA+AA | 8/274 | 8/62 | 10/289 | 0.003 | 0.005 | 3.729 (1.415–9.830) | 0.002 | 0.226 (0.082–0.626) |
| Allele G/A | 98/466 | 42/98 | 89/509 | 0.000 | 0.000 | 2.451 (1.601–3.752) | 0.001 | 0.491 (0.322–0.748) |
LEPR – leptin receptor; SNP – single nucleotide polymorphism; OR – odds ratio; CI – confidence interval; n – number.
Randomized comparison of mild-moderate keloid, severe keloid and normal controls;
Severe keloid vs normal controls;
Mild-moderate keloid vs severe keloid.
Associations between LEPR SNPs and family history of keloids.
| SNP | Family-history kleoid | No-family-history keloid | Normal controls | OR (95%) CI | OR (95%) CI | |||
|---|---|---|---|---|---|---|---|---|
| rs1137101 | ||||||||
| Codominant alleles AA/GG | 3/46 | 8/227 | 2/231 | 7.533 (1.224–46.349) | 4.070 (0.855–19.376) | |||
| Dominant AA+GA/GG | 12/46 | 67/227 | 68/231 | 0.937 | 0.732 | 0.886 (0.444–1.768) | 0.989 | 1.003 (0.683–1.472) |
| Recessive AA/GA+GG | 3/55 | 8/286 | 2/297 | 0.039 | 0.008 | 8.100 (1.323–49.603) | 0.052 | 4.154 (0.875–19.727) |
| Allele G/A | 101/15 | 513/75 | 528/70 | 0.839 | 0.709 | 0.893 (0.491–1.622) | 0.581 | 0.907 (0.641–1.284) |
| rs1938496 | ||||||||
| Codominant alleles CC/TT | 5/38 | 19/179 | 10/191 | 2.513 (0.813–7.769) | 2.027 (0.918–4.478) | |||
| Dominant CT+CC/TT | 20/38 | 115/179 | 108/191 | 0.674 | 0.812 | 0.931 (0.516–1.680) | 0.452 | 1.136 (0.815–1.584) |
| Recessive CC/CT+TT | 5/53 | 19/275 | 10/289 | 0.111 | 0.067 | 2.726 (0.896–8.296) | 0.078 | 1.997 (0.912–4.370) |
| Allele C/T | 25/91 | 134/454 | 118/480 | 0.436 | 0.654 | 1.118 (0.687–1.817) | 0.198 | 1.201 (0.909–1.587) |
| rs6588147 | ||||||||
| Codominant alleles AA/GG | 2/40 | 8/219 | 7/231 | 1.650 (0.331–8.229) | 1.205 (0.430–3.380) | |||
| Dominant GA+AA/GG | 18/40 | 75/219 | 68/231 | 0.374 | 0.177 | 1.529 (0.824–2.838) | 0.431 | 1.163 (0.798–1.696) |
| Recessive AA/GA+GG | 2/56 | 8/286 | 7/292 | 0.878 | 0.623 | 1.490 (0.302–7.359) | 0.768 | 1.167 (0.418–3.260) |
| Allele G/A | 96/20 | 505/83 | 523/75 | 0.368 | 0.173 | 0.688 (0.401–1.180) | 0.425 | 0.873 (0.624–1.220) |
| rs7555955 | ||||||||
| Codominant alleles GG/AA | 3/35 | 13/193 | 10/220 | 1.886 (0.494–7.192) | 1.482 (0.635–3.456) | |||
| Dominant GA+GG/AA | 23/35 | 101/193 | 79/220 | 0.039 | 0.041 | 1.830 (1.019–3.287) | 0.036 | 1.457 (1.025–2.073) |
| Recessive GG/GA+AA | 3/55 | 13/281 | 10/289 | 0.712 | 0.496 | 1.576 (0.420–5.913) | 0.497 | 1.337 (0.577–3.099) |
| Allele G/A | 26/90 | 114/474 | 89/509 | 0.045 | 0.043 | 1.652 (1.011–2.700) | 0.039 | 1.375 (1.015–1.864) |
LEPR – leptin receptor; SNP – single nucleotide polymorphism; OR – odds ratio; CI – confidence interval.
Family-history keloid vs no-family-history keloid vs normal controls;
Family-history keloid vs normal controls;
No-family-history keloid vs normal controls.
Bold fonts indicate the P values of codominant alleles in different groups.