Literature DB >> 33676097

Comparative validation of multi-instance instrument segmentation in endoscopy: Results of the ROBUST-MIS 2019 challenge.

Tobias Roß1, Annika Reinke2, Peter M Full3, Martin Wagner4, Hannes Kenngott4, Martin Apitz4, Hellena Hempe5, Diana Mindroc-Filimon5, Patrick Scholz6, Thuy Nuong Tran5, Pierangela Bruno7, Pablo Arbeláez8, Gui-Bin Bian9, Sebastian Bodenstedt10, Jon Lindström Bolmgren11, Laura Bravo-Sánchez8, Hua-Bin Chen9, Cristina González8, Dong Guo12, Pål Halvorsen13, Pheng-Ann Heng14, Enes Hosgor11, Zeng-Guang Hou9, Fabian Isensee3, Debesh Jha15, Tingting Jiang16, Yueming Jin14, Kadir Kirtac11, Sabrina Kletz17, Stefan Leger10, Zhixuan Li16, Klaus H Maier-Hein18, Zhen-Liang Ni9, Michael A Riegler19, Klaus Schoeffmann17, Ruohua Shi16, Stefanie Speidel10, Michael Stenzel11, Isabell Twick11, Gutai Wang12, Jiacheng Wang20, Liansheng Wang20, Lu Wang12, Yujie Zhang20, Yan-Jie Zhou9, Lei Zhu14, Manuel Wiesenfarth21, Annette Kopp-Schneider21, Beat P Müller-Stich4, Lena Maier-Hein5.   

Abstract

Intraoperative tracking of laparoscopic instruments is often a prerequisite for computer and robotic-assisted interventions. While numerous methods for detecting, segmenting and tracking of medical instruments based on endoscopic video images have been proposed in the literature, key limitations remain to be addressed: Firstly, robustness, that is, the reliable performance of state-of-the-art methods when run on challenging images (e.g. in the presence of blood, smoke or motion artifacts). Secondly, generalization; algorithms trained for a specific intervention in a specific hospital should generalize to other interventions or institutions. In an effort to promote solutions for these limitations, we organized the Robust Medical Instrument Segmentation (ROBUST-MIS) challenge as an international benchmarking competition with a specific focus on the robustness and generalization capabilities of algorithms. For the first time in the field of endoscopic image processing, our challenge included a task on binary segmentation and also addressed multi-instance detection and segmentation. The challenge was based on a surgical data set comprising 10,040 annotated images acquired from a total of 30 surgical procedures from three different types of surgery. The validation of the competing methods for the three tasks (binary segmentation, multi-instance detection and multi-instance segmentation) was performed in three different stages with an increasing domain gap between the training and the test data. The results confirm the initial hypothesis, namely that algorithm performance degrades with an increasing domain gap. While the average detection and segmentation quality of the best-performing algorithms is high, future research should concentrate on detection and segmentation of small, crossing, moving and transparent instrument(s) (parts).
Copyright © 2020. Published by Elsevier B.V.

Keywords:  Minimally invasive surgery; Multi-instance instrument; Robustness and generalization; Surgical data science

Year:  2020        PMID: 33676097     DOI: 10.1016/j.media.2020.101920

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  8 in total

1.  The Medical Segmentation Decathlon.

Authors:  Michela Antonelli; Annika Reinke; Spyridon Bakas; Keyvan Farahani; Annette Kopp-Schneider; Bennett A Landman; Geert Litjens; Bjoern Menze; Olaf Ronneberger; Ronald M Summers; Bram van Ginneken; Michel Bilello; Patrick Bilic; Patrick F Christ; Richard K G Do; Marc J Gollub; Stephan H Heckers; Henkjan Huisman; William R Jarnagin; Maureen K McHugo; Sandy Napel; Jennifer S Golia Pernicka; Kawal Rhode; Catalina Tobon-Gomez; Eugene Vorontsov; James A Meakin; Sebastien Ourselin; Manuel Wiesenfarth; Pablo Arbeláez; Byeonguk Bae; Sihong Chen; Laura Daza; Jianjiang Feng; Baochun He; Fabian Isensee; Yuanfeng Ji; Fucang Jia; Ildoo Kim; Klaus Maier-Hein; Dorit Merhof; Akshay Pai; Beomhee Park; Mathias Perslev; Ramin Rezaiifar; Oliver Rippel; Ignacio Sarasua; Wei Shen; Jaemin Son; Christian Wachinger; Liansheng Wang; Yan Wang; Yingda Xia; Daguang Xu; Zhanwei Xu; Yefeng Zheng; Amber L Simpson; Lena Maier-Hein; M Jorge Cardoso
Journal:  Nat Commun       Date:  2022-07-15       Impact factor: 17.694

Review 2.  Surgical data science - from concepts toward clinical translation.

Authors:  Lena Maier-Hein; Matthias Eisenmann; Duygu Sarikaya; Keno März; Toby Collins; Anand Malpani; Johannes Fallert; Hubertus Feussner; Stamatia Giannarou; Pietro Mascagni; Hirenkumar Nakawala; Adrian Park; Carla Pugh; Danail Stoyanov; Swaroop S Vedula; Kevin Cleary; Gabor Fichtinger; Germain Forestier; Bernard Gibaud; Teodor Grantcharov; Makoto Hashizume; Doreen Heckmann-Nötzel; Hannes G Kenngott; Ron Kikinis; Lars Mündermann; Nassir Navab; Sinan Onogur; Tobias Roß; Raphael Sznitman; Russell H Taylor; Minu D Tizabi; Martin Wagner; Gregory D Hager; Thomas Neumuth; Nicolas Padoy; Justin Collins; Ines Gockel; Jan Goedeke; Daniel A Hashimoto; Luc Joyeux; Kyle Lam; Daniel R Leff; Amin Madani; Hani J Marcus; Ozanan Meireles; Alexander Seitel; Dogu Teber; Frank Ückert; Beat P Müller-Stich; Pierre Jannin; Stefanie Speidel
Journal:  Med Image Anal       Date:  2021-11-18       Impact factor: 13.828

Review 3.  Artificial intelligence assisted display in thoracic surgery: development and possibilities.

Authors:  Zhuxing Chen; Yudong Zhang; Zeping Yan; Junguo Dong; Weipeng Cai; Yongfu Ma; Jipeng Jiang; Keyao Dai; Hengrui Liang; Jianxing He
Journal:  J Thorac Dis       Date:  2021-12       Impact factor: 3.005

4.  Evolving robotic surgery training and improving patient safety, with the integration of novel technologies.

Authors:  I-Hsuan Alan Chen; Ahmed Ghazi; Ashwin Sridhar; Danail Stoyanov; Mark Slack; John D Kelly; Justin W Collins
Journal:  World J Urol       Date:  2020-11-06       Impact factor: 4.226

5.  Utility of the Simulated Outcomes Following Carotid Artery Laceration Video Data Set for Machine Learning Applications.

Authors:  Guillaume Kugener; Dhiraj J Pangal; Tyler Cardinal; Casey Collet; Elizabeth Lechtholz-Zey; Sasha Lasky; Shivani Sundaram; Nicholas Markarian; Yichao Zhu; Arman Roshannai; Aditya Sinha; X Y Han; Vardan Papyan; Andrew Hung; Animashree Anandkumar; Bozena Wrobel; Gabriel Zada; Daniel A Donoho
Journal:  JAMA Netw Open       Date:  2022-03-01

6.  Robotic Endoscope Control Via Autonomous Instrument Tracking.

Authors:  Caspar Gruijthuijsen; Luis C Garcia-Peraza-Herrera; Gianni Borghesan; Dominiek Reynaerts; Jan Deprest; Sebastien Ourselin; Tom Vercauteren; Emmanuel Vander Poorten
Journal:  Front Robot AI       Date:  2022-04-11

7.  Robust hand tracking for surgical telestration.

Authors:  Felix Nickel; Lena Maier-Hein; Lucas-Raphael Müller; Jens Petersen; Amine Yamlahi; Philipp Wise; Tim J Adler; Alexander Seitel; Karl-Friedrich Kowalewski; Beat Müller; Hannes Kenngott
Journal:  Int J Comput Assist Radiol Surg       Date:  2022-05-27       Impact factor: 3.421

Review 8.  Artificial intelligence-based computer vision in surgery: Recent advances and future perspectives.

Authors:  Daichi Kitaguchi; Nobuyoshi Takeshita; Hiro Hasegawa; Masaaki Ito
Journal:  Ann Gastroenterol Surg       Date:  2021-10-08
  8 in total

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