Literature DB >> 33673752

Genome Sequence Data of MAT1-1 and MAT1-2 Idiomorphs from Verticillium dahliae.

Ya-Duo Zhang1, Yuan-Yuan Zhang2, Jie-Yin Chen1, Jin-Qun Huang3, Jian Zhang2, Lin Liu2, Dan Wang1, Jun Zhao2, Jian Song1, Ran Li1, Lin Yang3, Zhi-Qiang Kong1, Steven J Klosterman4, Krishna V Subbarao5, Xiao-Feng Dai1, Dan-Dan Zhang1.   

Abstract

Though Verticillium dahliae is an asexually reproducing fungus, it is considered heterothallic owing to the presence of only one of the two mating-type idiomorphs (MAT1-1 or MAT1-2) in individual isolates. But sexual reproduction has never been observed either in nature or in the laboratory. All of the genomic information in the literature thus far has therefore come from studies on isolates carrying only the MAT1-2 idiomorph. Herein, we sequenced and compared high-quality reference genomes of MAT1-1 strain S011 and MAT1-2 strain S023 obtained from the same sunflower field. The two genomic sequences displayed high synteny, and encoded similar number genes, a similarity especially notable among pathogenicity-related genes. Homolog analysis between these two genomes revealed that 80% of encoded genes are highly conserved (95% identity and coverage), but only 20% of the single copy genes were identical. These novel genome resources will support the analysis of the structure and function of the two idiomorphs and provide valuable tools to elucidate the evolution and potential mechanisms of sexual reproduction in V. dahliae.

Entities:  

Keywords:  analytical and theoretical plant pathology; bacteriology; bioinformatics; disease control and pest management; evolution bacterial pathogens; fungal pathogens; mycology

Mesh:

Year:  2021        PMID: 33673752     DOI: 10.1094/PHYTO-01-21-0012-A

Source DB:  PubMed          Journal:  Phytopathology        ISSN: 0031-949X            Impact factor:   4.025


  1 in total

1.  Combined assembly of long and short sequencing reads improve the efficiency of exploring the soil metagenome.

Authors:  Guoshun Xu; Liwen Zhang; Xiaoqing Liu; Feifei Guan; Yuquan Xu; Haitao Yue; Jin-Qun Huang; Jieyin Chen; Ningfeng Wu; Jian Tian
Journal:  BMC Genomics       Date:  2022-01-07       Impact factor: 3.969

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.