Literature DB >> 33672882

Biocatalytic C-C Bond Formation for One Carbon Resource Utilization.

Qiaoyu Yang1,2,3, Xiaoxian Guo1,2, Yuwan Liu1,2, Huifeng Jiang1,2.   

Abstract

The carbon-carbon bond formation has always been one of the most important reactions in C1 resource utilization. Compared to traditional organic synthesis methods, biocatalytic C-C bond formation offers a green and potent alternative for C1 transformation. In recent years, with the development of synthetic biology, more and more carboxylases and C-C ligases have been mined and designed for the C1 transformation in vitro and C1 assimilation in vivo. This article presents an overview of C-C bond formation in biocatalytic C1 resource utilization is first provided. Sets of newly mined and designed carboxylases and ligases capable of catalyzing C-C bond formation for the transformation of CO2, formaldehyde, CO, and formate are then reviewed, and their catalytic mechanisms are discussed. Finally, the current advances and the future perspectives for the development of catalysts for C1 resource utilization are provided.

Entities:  

Keywords:  C-C ligases; C1 resource utilization; carboxylases; designed pathway

Mesh:

Substances:

Year:  2021        PMID: 33672882      PMCID: PMC7918591          DOI: 10.3390/ijms22041890

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  88 in total

1.  Asymmetric self- and cross-aldol reactions of glycolaldehyde catalyzed by D-fructose-6-phosphate aldolase.

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2.  Carboxylation mechanism and stereochemistry of crotonyl-CoA carboxylase/reductase, a carboxylating enoyl-thioester reductase.

Authors:  Tobias J Erb; Volker Brecht; Georg Fuchs; Michael Müller; Birgit E Alber
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-20       Impact factor: 11.205

3.  Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.

Authors:  Boguslaw Stec
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-29       Impact factor: 11.205

4.  Synthesis of C5-dicarboxylic acids from C2-units involving crotonyl-CoA carboxylase/reductase: the ethylmalonyl-CoA pathway.

Authors:  Tobias J Erb; Ivan A Berg; Volker Brecht; Michael Müller; Georg Fuchs; Birgit E Alber
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-04       Impact factor: 11.205

5.  Core Catalysis of the Reductive Glycine Pathway Demonstrated in Yeast.

Authors:  Jorge Gonzalez de la Cruz; Fabian Machens; Katrin Messerschmidt; Arren Bar-Even
Journal:  ACS Synth Biol       Date:  2019-04-24       Impact factor: 5.110

6.  The industrial yeast Pichia pastoris is converted from a heterotroph into an autotroph capable of growth on CO2.

Authors:  Thomas Gassler; Michael Sauer; Brigitte Gasser; Michael Egermeier; Christina Troyer; Tim Causon; Stephan Hann; Diethard Mattanovich; Matthias G Steiger
Journal:  Nat Biotechnol       Date:  2019-12-16       Impact factor: 54.908

7.  2-Hydroxyacyl-CoA lyase catalyzes acyloin condensation for one-carbon bioconversion.

Authors:  Alexander Chou; James M Clomburg; Shuai Qian; Ramon Gonzalez
Journal:  Nat Chem Biol       Date:  2019-08-05       Impact factor: 15.040

8.  New cofactor supports α,β-unsaturated acid decarboxylation via 1,3-dipolar cycloaddition.

Authors:  Karl A P Payne; Mark D White; Karl Fisher; Basile Khara; Samuel S Bailey; David Parker; Nicholas J W Rattray; Drupad K Trivedi; Royston Goodacre; Rebecca Beveridge; Perdita Barran; Stephen E J Rigby; Nigel S Scrutton; Sam Hay; David Leys
Journal:  Nature       Date:  2015-06-17       Impact factor: 49.962

9.  Sugar Synthesis from CO2 in Escherichia coli.

Authors:  Niv Antonovsky; Shmuel Gleizer; Elad Noor; Yehudit Zohar; Elad Herz; Uri Barenholz; Lior Zelcbuch; Shira Amram; Aryeh Wides; Naama Tepper; Dan Davidi; Yinon Bar-On; Tasneem Bareia; David G Wernick; Ido Shani; Sergey Malitsky; Ghil Jona; Arren Bar-Even; Ron Milo
Journal:  Cell       Date:  2016-06-23       Impact factor: 41.582

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