Literature DB >> 33672287

KRAB-ZFP Transcriptional Regulators Acting as Oncogenes and Tumor Suppressors: An Overview.

Joanna Sobocińska1, Sara Molenda1, Marta Machnik1,2, Urszula Oleksiewicz1,2.   

Abstract

Krüppel-associated box zinc finger proteins (KRAB-ZFPs) constitute the largest family of transcriptional factors exerting co-repressor functions in mammalian cells. In general, KRAB-ZFPs have a dual structure. They may bind to specific DNA sequences via zinc finger motifs and recruit a repressive complex through the KRAB domain. Such a complex mediates histone deacetylation, trimethylation of histone 3 at lysine 9 (H3K9me3), and subsequent heterochromatization. Nevertheless, apart from their repressive role, KRAB-ZFPs may also co-activate gene transcription, likely through interaction with other factors implicated in transcriptional control. KRAB-ZFPs play essential roles in various biological processes, including development, imprinting, retroelement silencing, and carcinogenesis. Cancer cells possess multiple genomic, epigenomic, and transcriptomic aberrations. A growing number of data indicates that the expression of many KRAB-ZFPs is altered in several tumor types, in which they may act as oncogenes or tumor suppressors. Hereby, we review the available literature describing the oncogenic and suppressive roles of various KRAB-ZFPs in cancer. We focused on their association with the clinicopathological features and treatment response, as well as their influence on the cancer cell phenotype. Moreover, we summarized the identified upstream and downstream molecular mechanisms that may govern the functioning of KRAB-ZFPs in a cancer setting.

Entities:  

Keywords:  KRAB-ZFPs; ZBRK1; ZFP57; ZKSCAN3; ZNF224; ZNF300; ZNF471; cancer; epigenetic repressor

Mesh:

Substances:

Year:  2021        PMID: 33672287      PMCID: PMC7926519          DOI: 10.3390/ijms22042212

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  162 in total

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Authors:  Alessandra Cirillo; Anna Di Salle; Orsolina Petillo; Mariarosa A B Melone; Giovanna Grimaldi; Alfredo Bellotti; Giovanni Torelli; Maria Serena De' Santi; Giovanna Cantatore; Alfredo Marinelli; Umberto Galderisi; Gianfranco Peluso
Journal:  Cancer Biol Ther       Date:  2014-03-11       Impact factor: 4.742

2.  TIPUH1 encodes a novel KRAB zinc-finger protein highly expressed in human hepatocellular carcinomas.

Authors:  F P Silva; R Hamamoto; Y Furukawa; Y Nakamura
Journal:  Oncogene       Date:  2006-03-27       Impact factor: 9.867

3.  The Embryonic Stem Cell-Specific Transcription Factor ZFP57 Promotes Liver Metastasis of Colorectal Cancer.

Authors:  Yasuhiro Shoji; Hiroyuki Takamura; Itasu Ninomiya; Sachio Fushida; Yuhki Tada; Takashi Yokota; Tetsuo Ohta; Hiroshi Koide
Journal:  J Surg Res       Date:  2019-01-22       Impact factor: 2.192

4.  Pan-Cancer Landscape of Aberrant DNA Methylation across Human Tumors.

Authors:  Sadegh Saghafinia; Marco Mina; Nicolo Riggi; Douglas Hanahan; Giovanni Ciriello
Journal:  Cell Rep       Date:  2018-10-23       Impact factor: 9.423

5.  High-resolution mapping of DNA hypermethylation and hypomethylation in lung cancer.

Authors:  Tibor A Rauch; Xueyan Zhong; Xiwei Wu; Melody Wang; Kemp H Kernstine; Zunde Wang; Arthur D Riggs; Gerd P Pfeifer
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-27       Impact factor: 11.205

Review 6.  Cisplatin: mode of cytotoxic action and molecular basis of resistance.

Authors:  Zahid H Siddik
Journal:  Oncogene       Date:  2003-10-20       Impact factor: 9.867

7.  Novel Serum Biomarkers to Differentiate Cholangiocarcinoma from Benign Biliary Tract Diseases Using a Proteomic Approach.

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Journal:  Dis Markers       Date:  2015-04-28       Impact factor: 3.434

8.  Allele-specific binding of ZFP57 in the epigenetic regulation of imprinted and non-imprinted monoallelic expression.

Authors:  Ruslan Strogantsev; Felix Krueger; Kazuki Yamazawa; Hui Shi; Poppy Gould; Megan Goldman-Roberts; Kirsten McEwen; Bowen Sun; Roger Pedersen; Anne C Ferguson-Smith
Journal:  Genome Biol       Date:  2015-05-30       Impact factor: 13.583

9.  The expression signature of cancer-associated KRAB-ZNF factors identified in TCGA pan-cancer transcriptomic data.

Authors:  Marta Machnik; Rafał Cylwa; Kornel Kiełczewski; Przemysław Biecek; Triantafillos Liloglou; Andrzej Mackiewicz; Urszula Oleksiewicz
Journal:  Mol Oncol       Date:  2019-02-16       Impact factor: 6.603

Review 10.  Dynamic Signatures of the Epigenome: Friend or Foe?

Authors:  Marta Machnik; Urszula Oleksiewicz
Journal:  Cells       Date:  2020-03-07       Impact factor: 6.600

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  10 in total

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Journal:  Cancer Genomics Proteomics       Date:  2022 May-Jun       Impact factor: 4.069

2.  Cannabis significantly alters DNA methylation of the human ovarian follicle in a concentration-dependent manner.

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3.  Enhanced Expression of Human Endogenous Retroviruses, TRIM28 and SETDB1 in Autism Spectrum Disorder.

Authors:  Pier-Angelo Tovo; Chiara Davico; Daniele Marcotulli; Benedetto Vitiello; Valentina Daprà; Cristina Calvi; Paola Montanari; Andrea Carpino; Ilaria Galliano; Massimiliano Bergallo
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4.  Gene Expression Monotonicity across Bladder Cancer Stages Informs on the Molecular Pathogenesis and Identifies a Prognostic Eight-Gene Signature.

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Journal:  Cancers (Basel)       Date:  2022-05-21       Impact factor: 6.575

5.  Polympact: exploring functional relations among common human genetic variants.

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6.  Molecular Analysis of ZNF71 KRAB in Non-Small-Cell Lung Cancer.

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7.  Loss of ZNF677 expression is a predictive biomarker for lymph node metastasis in Middle Eastern Colorectal Cancer.

Authors:  Abdul K Siraj; Sandeep Kumar Parvathareddy; Nabil Siraj; Khadija Al-Obaisi; Saud M Aldughaither; Hadeel M AlManea; Hussah F AlHussaini; Fouad Al-Dayel; Khawla S Al-Kuraya
Journal:  Sci Rep       Date:  2021-11-16       Impact factor: 4.379

8.  Enhanced expression of endogenous retroviruses and of TRIM28 and SETDB1 in children with food allergy.

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Journal:  Clin Transl Allergy       Date:  2022-03       Impact factor: 5.871

9.  The KRAB Domain of ZNF10 Guides the Identification of Specific Amino Acids That Transform the Ancestral KRAB-A-Related Domain Present in Human PRDM9 into a Canonical Modern KRAB-A Domain.

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Journal:  Int J Mol Sci       Date:  2022-01-19       Impact factor: 5.923

10.  Transcription Factors in Cancer.

Authors:  Tomasz Wilanowski; Sebastian Dworkin
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  10 in total

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