Literature DB >> 33671215

Transposable Elements and Stress in Vertebrates: An Overview.

Anna Maria Pappalardo1, Venera Ferrito1, Maria Assunta Biscotti2, Adriana Canapa2, Teresa Capriglione3.   

Abstract

Since their identification as genomic regulatory elements, Transposable Elements (TEs) were considered, at first, molecular parasites and later as an important source of genetic diversity and regulatory innovations. In vertebrates in particular, TEs have been recognized as playing an important role in major evolutionary transitions and biodiversity. Moreover, in the last decade, a significant number of papers has been published highlighting a correlation between TE activity and exposition to environmental stresses and dietary factors. In this review we present an overview of the impact of TEs in vertebrate genomes, report the silencing mechanisms adopted by host genomes to regulate TE activity, and finally we explore the effects of environmental and dietary factor exposures on TE activity in mammals, which is the most studied group among vertebrates. The studies here reported evidence that several factors can induce changes in the epigenetic status of TEs and silencing mechanisms leading to their activation with consequent effects on the host genome. The study of TE can represent a future challenge for research for developing effective markers able to detect precocious epigenetic changes and prevent human diseases.

Entities:  

Keywords:  environmental and dietary factors; transposable elements; vertebrates

Mesh:

Substances:

Year:  2021        PMID: 33671215      PMCID: PMC7922186          DOI: 10.3390/ijms22041970

Source DB:  PubMed          Journal:  Int J Mol Sci        ISSN: 1422-0067            Impact factor:   5.923


  136 in total

Review 1.  Transposable element contributions to plant gene and genome evolution.

Authors:  J L Bennetzen
Journal:  Plant Mol Biol       Date:  2000-01       Impact factor: 4.076

2.  Multiple lineages of the non-LTR retrotransposon Rex1 with varying success in invading fish genomes.

Authors:  J N Volff; C Körting; M Schartl
Journal:  Mol Biol Evol       Date:  2000-11       Impact factor: 16.240

3.  Maternal epigenetics and methyl supplements affect agouti gene expression in Avy/a mice.

Authors:  G L Wolff; R L Kodell; S R Moore; C A Cooney
Journal:  FASEB J       Date:  1998-08       Impact factor: 5.191

4.  V-SINEs: a new superfamily of vertebrate SINEs that are widespread in vertebrate genomes and retain a strongly conserved segment within each repetitive unit.

Authors:  Ikuo Ogiwara; Masaki Miya; Kazuhiko Ohshima; Norihiro Okada
Journal:  Genome Res       Date:  2002-02       Impact factor: 9.043

5.  Abundant recent activity of retrovirus-like retrotransposons within and among flycatcher species implies a rich source of structural variation in songbird genomes.

Authors:  Alexander Suh; Linnéa Smeds; Hans Ellegren
Journal:  Mol Ecol       Date:  2017-12-12       Impact factor: 6.185

6.  Increased l1 retrotransposition in the neuronal genome in schizophrenia.

Authors:  Miki Bundo; Manabu Toyoshima; Yohei Okada; Wado Akamatsu; Junko Ueda; Taeko Nemoto-Miyauchi; Fumiko Sunaga; Michihiro Toritsuka; Daisuke Ikawa; Akiyoshi Kakita; Motoichiro Kato; Kiyoto Kasai; Toshifumi Kishimoto; Hiroyuki Nawa; Hideyuki Okano; Takeo Yoshikawa; Tadafumi Kato; Kazuya Iwamoto
Journal:  Neuron       Date:  2014-01-02       Impact factor: 17.173

7.  Retropositional parasitism of SINEs on LINEs: identification of SINEs and LINEs in elasmobranchs.

Authors:  I Ogiwara; M Miya; K Ohshima; N Okada
Journal:  Mol Biol Evol       Date:  1999-09       Impact factor: 16.240

8.  Repression of transposable elements by histone biotinylation.

Authors:  Janos Zempleni; Yap Ching Chew; Baolong Bao; Valerie Pestinger; Subhashinee S K Wijeratne
Journal:  J Nutr       Date:  2009-10-07       Impact factor: 4.798

9.  Extensive somatic L1 retrotransposition in colorectal tumors.

Authors:  Szilvia Solyom; Adam D Ewing; Eric P Rahrmann; Tara Doucet; Heather H Nelson; Michael B Burns; Reuben S Harris; David F Sigmon; Alex Casella; Bracha Erlanger; Sarah Wheelan; Kyle R Upton; Ruchi Shukla; Geoffrey J Faulkner; David A Largaespada; Haig H Kazazian
Journal:  Genome Res       Date:  2012-09-11       Impact factor: 9.043

10.  Evolutionary insights in Amazonian turtles (Testudines, Podocnemididae): co-location of 5S rDNA and U2 snRNA and wide distribution of Tc1/Mariner.

Authors:  Manoella Gemaque Cavalcante; Cleusa Yoshiko Nagamachi; Julio Cesar Pieczarka; Renata Coelho Rodrigues Noronha
Journal:  Biol Open       Date:  2020-04-28       Impact factor: 2.422

View more
  5 in total

1.  Transcriptional Contribution of Transposable Elements in Relation to Salinity Conditions in Teleosts and Silencing Mechanisms Involved.

Authors:  Elisa Carotti; Federica Carducci; Samuele Greco; Marco Gerdol; Daniele Di Marino; Nunzio Perta; Anna La Teana; Adriana Canapa; Marco Barucca; Maria Assunta Biscotti
Journal:  Int J Mol Sci       Date:  2022-05-06       Impact factor: 6.208

Review 2.  Transposable Elements and Human Diseases: Mechanisms and Implication in the Response to Environmental Pollutants.

Authors:  Benoît Chénais
Journal:  Int J Mol Sci       Date:  2022-02-25       Impact factor: 5.923

Review 3.  Transposable Elements in the Genome of Human Parasite Schistosoma mansoni: A Review.

Authors:  Gisele Strieder Philippsen
Journal:  Trop Med Infect Dis       Date:  2021-07-09

4.  Investigation of the activity of transposable elements and genes involved in their silencing in the newt Cynops orientalis, a species with a giant genome.

Authors:  Federica Carducci; Elisa Carotti; Marco Gerdol; Samuele Greco; Adriana Canapa; Marco Barucca; Maria Assunta Biscotti
Journal:  Sci Rep       Date:  2021-07-20       Impact factor: 4.379

Review 5.  Transposable Elements: Major Players in Shaping Genomic and Evolutionary Patterns.

Authors:  Nunzia Colonna Romano; Laura Fanti
Journal:  Cells       Date:  2022-03-19       Impact factor: 6.600

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.