Literature DB >> 33670881

Primitive Compartmentalization for the Sustainable Replication of Genetic Molecules.

Ryo Mizuuchi1,2, Norikazu Ichihashi1,3,4.   

Abstract

Sustainable replication and evolution of genetic molecules such as RNA are likely requisites for the emergence of life; however, these processes are easily affected by the appearance of parasitic molecules that replicate by relying on the function of other molecules, while not contributing to their replication. A possible mechanism to repress parasite amplification is compartmentalization that segregates parasitic molecules and limits their access to functional genetic molecules. Although extent cells encapsulate genomes within lipid-based membranes, more primitive materials or simple geological processes could have provided compartmentalization on early Earth. In this review, we summarize the current understanding of the types and roles of primitive compartmentalization regarding sustainable replication of genetic molecules, especially from the perspective of the prevention of parasite replication. In addition, we also describe the ability of several environments to selectively accumulate longer genetic molecules, which could also have helped select functional genetic molecules rather than fast-replicating short parasitic molecules.

Entities:  

Keywords:  RNA; compartments; evolution; origins of life; parasites; replication

Year:  2021        PMID: 33670881      PMCID: PMC7997230          DOI: 10.3390/life11030191

Source DB:  PubMed          Journal:  Life (Basel)        ISSN: 2075-1729


  113 in total

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3.  Sustainable replication and coevolution of cooperative RNAs in an artificial cell-like system.

Authors:  Ryo Mizuuchi; Norikazu Ichihashi
Journal:  Nat Ecol Evol       Date:  2018-08-27       Impact factor: 15.460

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Authors:  Julie A Shay; Christopher Huynh; Paul G Higgs
Journal:  J Theor Biol       Date:  2014-09-22       Impact factor: 2.691

5.  Entrapment of nucleic acids in liposomes.

Authors:  P A Monnard; T Oberholzer; P Luisi
Journal:  Biochim Biophys Acta       Date:  1997-10-02

6.  Eutectic phase polymerization of activated ribonucleotide mixtures yields quasi-equimolar incorporation of purine and pyrimidine nucleobases.

Authors:  Pierre-Alain Monnard; Anastassia Kanavarioti; David W Deamer
Journal:  J Am Chem Soc       Date:  2003-11-12       Impact factor: 15.419

7.  Mineral Surface Chemistry and Nanoparticle-aggregation Control Membrane Self-Assembly.

Authors:  Nita Sahai; Hussein Kaddour; Punam Dalai; Ziqiu Wang; Garrett Bass; Min Gao
Journal:  Sci Rep       Date:  2017-03-07       Impact factor: 4.379

8.  Survival of RNA Replicators is much Easier in Protocells than in Surface-Based, Spatial Systems.

Authors:  Vismay Shah; Jonathan de Bouter; Quinn Pauli; Andrew S Tupper; Paul G Higgs
Journal:  Life (Basel)       Date:  2019-08-07

9.  Montmorillonite protection of an UV-irradiated hairpin ribozyme: evolution of the RNA world in a mineral environment.

Authors:  Elisa Biondi; Sergio Branciamore; Marie-Christine Maurel; Enzo Gallori
Journal:  BMC Evol Biol       Date:  2007-08-16       Impact factor: 3.260

10.  Enhanced transcription and translation in clay hydrogel and implications for early life evolution.

Authors:  Dayong Yang; Songming Peng; Mark R Hartman; Tiffany Gupton-Campolongo; Edward J Rice; Anna Kathryn Chang; Zi Gu; G Q Max Lu; Dan Luo
Journal:  Sci Rep       Date:  2013-11-07       Impact factor: 4.379

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  6 in total

1.  Evolutionary transition from a single RNA replicator to a multiple replicator network.

Authors:  Ryo Mizuuchi; Taro Furubayashi; Norikazu Ichihashi
Journal:  Nat Commun       Date:  2022-03-18       Impact factor: 17.694

2.  Hydrophobic-cationic peptides modulate RNA polymerase ribozyme activity by accretion.

Authors:  Peiying Li; Philipp Holliger; Shunsuke Tagami
Journal:  Nat Commun       Date:  2022-06-03       Impact factor: 17.694

3.  An Approach to the De Novo Synthesis of Life.

Authors:  Sijbren Otto
Journal:  Acc Chem Res       Date:  2021-12-29       Impact factor: 22.384

4.  Trends and Outlooks in Synthetic Biology: A Special Issue for Celebrating 10 Years of Life and Its Landmarks.

Authors:  Norizaku Ichihashi; Pasquale Stano
Journal:  Life (Basel)       Date:  2022-01-26

5.  A Mutation Threshold for Cooperative Takeover.

Authors:  Alexandre Champagne-Ruel; Paul Charbonneau
Journal:  Life (Basel)       Date:  2022-02-08

Review 6.  Connecting primitive phase separation to biotechnology, synthetic biology, and engineering.

Authors:  Tony Z Jia; Po-Hsiang Wang; Tatsuya Niwa; Irena Mamajanov
Journal:  J Biosci       Date:  2021       Impact factor: 1.826

  6 in total

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