Literature DB >> 33666691

Evaluation of one-step RT-PCR multiplex assay for body fluid identification.

Qinrui Yang1, Baonian Liu1,2, Yuxiang Zhou1, Yining Yao1, Zhihan Zhou1, Hui Li3, Chengchen Shao1, Kuan Sun1, Hongmei Xu1, Qiqun Tang4, Yiwen Shen5, Jianhui Xie6.   

Abstract

The discrimination of body fluid stains provides crucial evidence during the investigation of criminal cases. Previous studies have demonstrated the practical value of mRNA profiling in body fluid identification. Conventional strategy of mRNA profiling entails reverse transcription and PCR amplification in two separate procedures with different buffer systems. In this study, we subjected the one-step multiplex reverse transcription PCR strategy to mRNA profiling with the inclusion of the same 18 tissue-specific biomarkers in the F18plex system targeting peripheral blood, menstrual blood, vaginal secretion, saliva, semen, and urine. The Qiagen OneStep RT-PCR kit and Titanium One-Step RT-PCR kit were applied to multiplex construction, while reproducible profiling results were obtained with both kits. Compared to the F18plex system, similar expression profiles of biomarkers were obtained in targeted tissues, while expected cross-reaction was observed in non-targeted body fluids. However, CYP2B7P1 and SPINK5 were detected in menstrual blood samples, which was not observed using the F18plex system. Full-profiling results were obtained in all samples using 0.1 ng peripheral blood and semen RNA, and 1 ng menstrual blood, vaginal secretion, saliva, and urine RNA. In conclusion, the application of one-step mRNA profiling strategy could be a reliable and economical method for the simplified, specific, and simultaneous analysis of tissue-specific biomarkers for the discrimination of body fluid origin.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH, DE part of Springer Nature.

Entities:  

Keywords:  Body fluid identification; Multiplex assay; One-step RT-PCR; mRNA profiling

Year:  2021        PMID: 33666691     DOI: 10.1007/s00414-021-02535-w

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  24 in total

1.  The use of bacteria for the identification of vaginal secretions.

Authors:  Rachel I Fleming; SallyAnn Harbison
Journal:  Forensic Sci Int Genet       Date:  2010-01-19       Impact factor: 4.882

2.  DNA methylation-specific multiplex assays for body fluid identification.

Authors:  Ja Hyun An; Ajin Choi; Kyoung-Jin Shin; Woo Ick Yang; Hwan Young Lee
Journal:  Int J Legal Med       Date:  2012-06-01       Impact factor: 2.686

3.  Micro-RNA - A potential for forensic science?

Authors:  Cornelius Courts; Burkhard Madea
Journal:  Forensic Sci Int       Date:  2010-07-31       Impact factor: 2.395

4.  DNA methylation-based forensic tissue identification.

Authors:  Dan Frumkin; Adam Wasserstrom; Bruce Budowle; Ariane Davidson
Journal:  Forensic Sci Int Genet       Date:  2010-12-31       Impact factor: 4.882

5.  The determination of tissue-specific DNA methylation patterns in forensic biofluids using bisulfite modification and pyrosequencing.

Authors:  Tania Madi; Kuppareddi Balamurugan; Robin Bombardi; George Duncan; Bruce McCord
Journal:  Electrophoresis       Date:  2012-07       Impact factor: 3.535

6.  Microbiome-based body fluid identification of samples exposed to indoor conditions.

Authors:  Akos Dobay; Cordula Haas; Geoffrey Fucile; Nora Downey; Hilary G Morrison; Adelgunde Kratzer; Natasha Arora
Journal:  Forensic Sci Int Genet       Date:  2019-02-11       Impact factor: 4.882

7.  Simultaneous analysis of micro-RNA and DNA for determining the body fluid origin of DNA profiles.

Authors:  Donny van der Meer; Mari L Uchimoto; Graham Williams
Journal:  J Forensic Sci       Date:  2013-05-17       Impact factor: 1.832

8.  MicroRNA markers for forensic body fluid identification obtained from microarray screening and quantitative RT-PCR confirmation.

Authors:  Dmitry Zubakov; Anton W M Boersma; Ying Choi; Patricia F van Kuijk; Erik A C Wiemer; Manfred Kayser
Journal:  Int J Legal Med       Date:  2010-02-10       Impact factor: 2.686

9.  Evaluation of mRNA-based approach for identification of saliva and semen.

Authors:  Koichi Sakurada; Hiroshi Ikegaya; Hisayo Fukushima; Tomoko Akutsu; Ken Watanabe; Mineo Yoshino
Journal:  Leg Med (Tokyo)       Date:  2008-11-25       Impact factor: 1.376

10.  Detection of dermcidin for sweat identification by real-time RT-PCR and ELISA.

Authors:  Koichi Sakurada; Tomoko Akutsu; Hisayo Fukushima; Ken Watanabe; Mineo Yoshino
Journal:  Forensic Sci Int       Date:  2009-11-13       Impact factor: 2.395

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  1 in total

Review 1.  On the Identification of Body Fluids and Tissues: A Crucial Link in the Investigation and Solution of Crime.

Authors:  Titia Sijen; SallyAnn Harbison
Journal:  Genes (Basel)       Date:  2021-10-28       Impact factor: 4.096

  1 in total

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