Literature DB >> 33665584

A deeper look into natural sciences with physics-based and data-driven measures.

Davi Röhe Rodrigues1, Karin Everschor-Sitte1, Susanne Gerber2, Illia Horenko3.   

Abstract

With the development of machine learning in recent years, it is possible to glean much more information from an experimental data set to study matter. In this perspective, we discuss some state-of-the-art data-driven tools to analyze latent effects in data and explain their applicability in natural science, focusing on two recently introduced, physics-motivated computationally cheap tools-latent entropy and latent dimension. We exemplify their capabilities by applying them on several examples in the natural sciences and show that they reveal so far unobserved features such as, for example, a gradient in a magnetic measurement and a latent network of glymphatic channels from the mouse brain microscopy data. What sets these techniques apart is the relaxation of restrictive assumptions typical of many machine learning models and instead incorporating aspects that best fit the dynamical systems at hand.
© 2021 The Author(s).

Entities:  

Keywords:  Applied Physics; Artificial Intelligence; Computer Science; Magnetism; Physics

Year:  2021        PMID: 33665584      PMCID: PMC7907479          DOI: 10.1016/j.isci.2021.102171

Source DB:  PubMed          Journal:  iScience        ISSN: 2589-0042


  30 in total

1.  Brain superhighways.

Authors:  David J Begley
Journal:  Sci Transl Med       Date:  2012-08-15       Impact factor: 17.956

2.  Spatially explicit Bayesian clustering models in population genetics.

Authors:  Olivier François; Eric Durand
Journal:  Mol Ecol Resour       Date:  2010-05-17       Impact factor: 7.090

3.  Thermal skyrmion diffusion used in a reshuffler device.

Authors:  Jakub Zázvorka; Florian Jakobs; Daniel Heinze; Niklas Keil; Sascha Kromin; Samridh Jaiswal; Kai Litzius; Gerhard Jakob; Peter Virnau; Daniele Pinna; Karin Everschor-Sitte; Levente Rózsa; Andreas Donges; Ulrich Nowak; Mathias Kläui
Journal:  Nat Nanotechnol       Date:  2019-04-22       Impact factor: 39.213

4.  Genetic and statistical analyses of strong selection on polygenic traits: what, me normal?

Authors:  M Turelli; N H Barton
Journal:  Genetics       Date:  1994-11       Impact factor: 4.562

5.  A paravascular pathway facilitates CSF flow through the brain parenchyma and the clearance of interstitial solutes, including amyloid β.

Authors:  Jeffrey J Iliff; Minghuan Wang; Yonghong Liao; Benjamin A Plogg; Weiguo Peng; Georg A Gundersen; Helene Benveniste; G Edward Vates; Rashid Deane; Steven A Goldman; Erlend A Nagelhus; Maiken Nedergaard
Journal:  Sci Transl Med       Date:  2012-08-15       Impact factor: 17.956

6.  Equation-free mechanistic ecosystem forecasting using empirical dynamic modeling.

Authors:  Hao Ye; Richard J Beamish; Sarah M Glaser; Sue C H Grant; Chih-Hao Hsieh; Laura J Richards; Jon T Schnute; George Sugihara
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-02       Impact factor: 11.205

7.  Neuroscience. Garbage truck of the brain.

Authors:  Maiken Nedergaard
Journal:  Science       Date:  2013-06-28       Impact factor: 47.728

8.  Efficient Bayesian mixed-model analysis increases association power in large cohorts.

Authors:  Po-Ru Loh; George Tucker; Brendan K Bulik-Sullivan; Bjarni J Vilhjálmsson; Hilary K Finucane; Rany M Salem; Daniel I Chasman; Paul M Ridker; Benjamin M Neale; Bonnie Berger; Nick Patterson; Alkes L Price
Journal:  Nat Genet       Date:  2015-02-02       Impact factor: 38.330

9.  A Fast Incremental Gaussian Mixture Model.

Authors:  Rafael Coimbra Pinto; Paulo Martins Engel
Journal:  PLoS One       Date:  2015-10-07       Impact factor: 3.240

10.  Improving clustering by imposing network information.

Authors:  Susanne Gerber; Illia Horenko
Journal:  Sci Adv       Date:  2015-08-07       Impact factor: 14.136

View more
  3 in total

1.  Low-Cost Probabilistic 3D Denoising with Applications for Ultra-Low-Radiation Computed Tomography.

Authors:  Illia Horenko; Lukáš Pospíšil; Edoardo Vecchi; Steffen Albrecht; Alexander Gerber; Beate Rehbock; Albrecht Stroh; Susanne Gerber
Journal:  J Imaging       Date:  2022-05-31

2.  Skyrmion pinning energetics in thin film systems.

Authors:  Raphael Gruber; Jakub Zázvorka; Maarten A Brems; Davi R Rodrigues; Takaaki Dohi; Nico Kerber; Boris Seng; Mehran Vafaee; Karin Everschor-Sitte; Peter Virnau; Mathias Kläui
Journal:  Nat Commun       Date:  2022-06-06       Impact factor: 17.694

3.  Co-Inference of Data Mislabelings Reveals Improved Models in Genomics and Breast Cancer Diagnostics.

Authors:  Susanne Gerber; Lukas Pospisil; Stanislav Sys; Charlotte Hewel; Ali Torkamani; Illia Horenko
Journal:  Front Artif Intell       Date:  2022-01-05
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.