Literature DB >> 33664148

Draft Genome Sequence of Bacillus toyonensis Strain GM18, Isolated from Agricultural Soil.

Carlos J Moreno-Peña1, Jorge H García-García1, Cesar I Hernández-Vásquez1, Luis J Galán-Wong1, Benito Pereyra-Alférez2.   

Abstract

Bacillus toyonensis is a recently described species related to Bacillus cereus and Bacillus thuringiensis The GM18 strain previously identified as B. thuringiensis is now classified as B. toyonensis based on the RNA 16S sequence and whole-genome average nucleotide identity. The genome analysis revealed the presence of insecticide, nematicide, and antitumoral proteins.
Copyright © 2021 Moreno-Peña et al.

Entities:  

Year:  2021        PMID： 33664148      PMCID： PMC7936628          DOI： 10.1128/MRA.00008-21

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  10 in total

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Authors:  R S Travers; P A Martin; C F Reichelderfer
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3.  Prokka: rapid prokaryotic genome annotation.

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4.  Description of Bacillus toyonensis sp. nov., a novel species of the Bacillus cereus group, and pairwise genome comparisons of the species of the group by means of ANI calculations.

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Journal:  Syst Appl Microbiol       Date:  2013-06-19       Impact factor: 4.022

5.  Whole genome sequence of Bacillus thuringiensis ATCC 10792 and improved discrimination of Bacillus thuringiensis from Bacillus cereus group based on novel biomarkers.

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6.  Galaxy: a web-based genome analysis tool for experimentalists.

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7.  Using average nucleotide identity to improve taxonomic assignments in prokaryotic genomes at the NCBI.

Authors:  Stacy Ciufo; Sivakumar Kannan; Shobha Sharma; Azat Badretdin; Karen Clark; Seán Turner; Slava Brover; Conrad L Schoch; Avi Kimchi; Michael DiCuccio
Journal:  Int J Syst Evol Microbiol       Date:  2018-05-24       Impact factor: 2.747

8.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

9.  NCBI prokaryotic genome annotation pipeline.

Authors:  Tatiana Tatusova; Michael DiCuccio; Azat Badretdin; Vyacheslav Chetvernin; Eric P Nawrocki; Leonid Zaslavsky; Alexandre Lomsadze; Kim D Pruitt; Mark Borodovsky; James Ostell
Journal:  Nucleic Acids Res       Date:  2016-06-24       Impact factor: 16.971

10.  RefSeq: an update on prokaryotic genome annotation and curation.

Authors:  Daniel H Haft; Michael DiCuccio; Azat Badretdin; Vyacheslav Brover; Vyacheslav Chetvernin; Kathleen O'Neill; Wenjun Li; Farideh Chitsaz; Myra K Derbyshire; Noreen R Gonzales; Marc Gwadz; Fu Lu; Gabriele H Marchler; James S Song; Narmada Thanki; Roxanne A Yamashita; Chanjuan Zheng; Françoise Thibaud-Nissen; Lewis Y Geer; Aron Marchler-Bauer; Kim D Pruitt
Journal:  Nucleic Acids Res       Date:  2018-01-04       Impact factor: 16.971
  10 in total

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