Literature DB >> 33664144

Complete Genome and Plasmid Sequences of Three Fluviibacter phosphoraccumulans Polyphosphate-Accumulating Bacterioplankton Strains Isolated from Surface River Water.

Wataru Suda1, Yusuke Ogata2, Lena Takayasu2,3, Chie Shindo2, Keiji Watanabe4.   

Abstract

Fluviibacter phosphoraccumulans is a polyphosphate-accumulating freshwater bacterioplankton which is detected mainly from riverine environments. The type strain, SHINM1, and two other strains, ICHIJ1 and ICHIAU1, were isolated from surface river water in Japan. Here, we report the complete genome and plasmid sequences of three F. phosphoraccumulans strains.
Copyright © 2021 Suda et al.

Entities:  

Year:  2021        PMID： 33664144      PMCID： PMC7936642          DOI： 10.1128/MRA.01474-20

Source DB:  PubMed          Journal:  Microbiol Resour Announc        ISSN： 2576-098X


  9 in total

1.  OrthoANI: An improved algorithm and software for calculating average nucleotide identity.

Authors:  Imchang Lee; Yeong Ouk Kim; Sang-Cheol Park; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2015-11-09       Impact factor: 2.747

2.  Effective isolation of bacterioplankton genus Polynucleobacter from freshwater environments grown on photochemically degraded dissolved organic matter.

Authors:  Keiji Watanabe; Nobuyuki Komatsu; Yuichi Ishii; Masami Negishi
Journal:  FEMS Microbiol Ecol       Date:  2008-11-26       Impact factor: 4.194

3.  Ecological niche separation in the Polynucleobacter subclusters linked to quality of dissolved organic matter: a demonstration using a high sensitivity cultivation-based approach.

Authors:  Keiji Watanabe; Nobuyuki Komatsu; Tatsumi Kitamura; Yuichi Ishii; Ho-Dong Park; Ryo Miyata; Naohiro Noda; Yuji Sekiguchi; Takayuki Satou; Mirai Watanabe; Shigeki Yamamura; Akio Imai; Seiji Hayashi
Journal:  Environ Microbiol       Date:  2012-07-04       Impact factor: 5.491

4.  Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.

Authors:  Ryan R Wick; Louise M Judd; Claire L Gorrie; Kathryn E Holt
Journal:  PLoS Comput Biol       Date:  2017-06-08       Impact factor: 4.475

5.  Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.

Authors:  Sergey Koren; Brian P Walenz; Konstantin Berlin; Jason R Miller; Nicholas H Bergman; Adam M Phillippy
Journal:  Genome Res       Date:  2017-03-15       Impact factor: 9.043

6.  Complete Genome Sequence of Adlercreutzia sp. Strain 8CFCBH1, a Potent Producer of Equol, Isolated from Healthy Japanese Feces.

Authors:  Yusuke Ogata; Mitsuo Sakamoto; Moriya Ohkuma; Masahira Hattori; Wataru Suda
Journal:  Microbiol Resour Announc       Date:  2020-12-03

7.  DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.

Authors:  Yasuhiro Tanizawa; Takatomo Fujisawa; Yasukazu Nakamura
Journal:  Bioinformatics       Date:  2018-03-15       Impact factor: 6.937

8.  Complete Genome Sequence of Phascolarctobacterium faecium JCM 30894, a Succinate-Utilizing Bacterium Isolated from Human Feces.

Authors:  Yusuke Ogata; Wataru Suda; Nao Ikeyama; Masahira Hattori; Moriya Ohkuma; Mitsuo Sakamoto
Journal:  Microbiol Resour Announc       Date:  2019-01-17
  9 in total

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